RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PRSS56P0CW18 603 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 PROZP22891 400 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SLC6A2P23975 617 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SOX6P35712 828 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 PTGER3P43115 390 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 HCAR3P49019 387 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 DGKEP52429 567 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 DSTNP60981 165 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SPIBQ01892 262 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SF3B4Q15427 424 aaKnown RBP eCLIP12.03□□□□□ -0.48
BDNF-218ENST00000533246 ARMC4Q5T2S8 1044 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SPATA19Q7Z5L4 167 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 MMAAQ8IVH4 418 aaKnown RBP12.03□□□□□ -0.48
BDNF-218ENST00000533246 OLFM1Q99784 485 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 AIFM2Q9BRQ8 373 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 MCMBPQ9BTE3 642 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 EPS8L2Q9H6S3 715 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SIAEQ9HAT2 523 aa12.03□□□□□ -0.48
BDNF-218ENST00000533246 SORBS2O94875 1100 aaKnown RBP12.02□□□□□ -0.48
BDNF-218ENST00000533246 TNNI3P19429 210 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 FEN1P39748 380 aaKnown RBP12.02□□□□□ -0.48
BDNF-218ENST00000533246 UFM1P61960 85 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 CHRNA6Q15825 494 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 UPP1Q16831 310 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 ATAD3BQ5T9A4 648 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 EPGNQ6UW88 154 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 KIAA1324Q6UXG2 1013 aaKnown RBP12.02□□□□□ -0.48
BDNF-218ENST00000533246 DEF8Q6ZN54 512 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 CHST9Q7L1S5 443 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 LILRB4Q8NHJ6 448 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 TRIB2Q92519 343 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 ZNF224Q9NZL3 707 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 DEC1Q9P2X7 70 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 CCDC88AQ3V6T2 1871 aa12.02□□□□□ -0.48
BDNF-218ENST00000533246 SUV39H1O43463 412 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 NOS1APO75052 506 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 ARHGEF15O94989 841 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 ITIH1P19827 911 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 GJA5P36382 358 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MANFP55145 182 aaKnown RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 BNIP3Q12983 259 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 TRAF3Q13114 568 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 CILP2Q8IUL8 1156 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MINDY2Q8NBR6 621 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 PSMA8Q8TAA3 256 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 ANKRD49Q8WVL7 239 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 PPCDCQ96CD2 204 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 FEM1AQ9BSK4 669 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 ADI1Q9BV57 179 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 SMPD3Q9NY59 655 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 PDP1Q9P0J1 537 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 BBIP1A8MTZ0 92 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 TOR1BO14657 336 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 DCLK1O15075 740 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 SGTAO43765 313 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 DIRAS1O95057 198 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 EPHX1P07099 455 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 ANXA11P50995 505 aaKnown RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 CCR4P51679 360 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 LAPTM4AQ15012 233 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MED22Q15528 200 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 ZNF829Q3KNS6 432 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 ZNF789Q5FWF6 425 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 TMCO2Q7Z6W1 182 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 TMEM199Q8N511 208 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MAPK15Q8TD08 544 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 KAT2AQ92830 837 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 NELL1Q92832 810 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 REPS1Q96D71 796 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 DMRTB1Q96MA1 342 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 KIFC1Q9BW19 673 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 EXD2Q9NVH0 621 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MAGEL2Q9UJ55 1249 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 RPS6KA6Q9UK32 745 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 SPACA6W5XKT8 324 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 A0A1W2PRG6 482 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 MTMR11A4FU01 709 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 LDB2O43679 373 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 PFKMP08237 780 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 CCNA2P20248 432 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 BUD31P41223 144 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 C2orf80Q0P641 193 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 SMARCB1Q12824 385 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 TAF1AQ15573 450 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 TMEM220Q6QAJ8 160 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 Q6ZVU0 165 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 CHST15Q7LFX5 561 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 PARGQ86W56 976 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 EPHX4Q8IUS5 362 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 OR10G6Q8NH81 332 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 CYB5D2Q8WUJ1 264 aa12.02□□□□□ -0.49
BDNF-218ENST00000533246 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.02□□□□□ -0.49
BDNF-218ENST00000533246 CXorf21Q9HAI6 301 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms