RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RPS3P23396 243 aaKnown RBP eCLIP32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 PRDX3P30048 256 aaKnown RBP32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 SHMT2P34897 504 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 PRKG2Q13237 762 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 BRD3Q15059 726 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 CRTC2Q53ET0 693 aaPredicted RBP32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 DNAJC21Q5F1R6 531 aaKnown RBP32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 ADGRF3Q8IZF5 1079 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 MFSD3Q96ES6 412 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 STAMBPL1Q96FJ0 436 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 MED8Q96G25 268 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 ELMO2Q96JJ3 720 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 PDLIM2Q96JY6 352 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 P2RY12Q9H244 342 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 SYTL2Q9HCH5 934 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 XAB2Q9HCS7 855 aaKnown RBP32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 LNPEPQ9UIQ6 1025 aa32.06■■■□□ 2.72
SSSCA1-205ENST00000527920 GSAPA4D1B5 854 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 C2orf74A8MZ97 194 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 KDM1AO60341 852 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 PHF2O75151 1096 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 CDH3P22223 829 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 LINC00303Q3SY05 128 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 ANKRD22Q5VYY1 191 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 KIAA0930Q6ICG6 404 aaPredicted RBP32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 MRNIPQ6NTE8 343 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 LDB1Q86U70 411 aaPredicted RBP32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 CAND1Q86VP6 1230 aaKnown RBP32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 GALNT6Q8NCL4 622 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 GRK7Q8WTQ7 553 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 TWSG1Q9GZX9 223 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 LATS2Q9NRM7 1088 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 TRMT1Q9NXH9 659 aaKnown RBP32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 OR6C2Q9NZP2 312 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 GNPTGQ9UJJ9 305 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 ICKQ9UPZ9 632 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 CDYLQ9Y232 598 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 COL6A6A6NMZ7 2263 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 CFAP46Q8IYW2 2715 aa32.05■■■□□ 2.72
SSSCA1-205ENST00000527920 TMEM63AO94886 807 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 VAPBO95292 243 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 APOA4P06727 396 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 AOAHP28039 575 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 MC1RQ01726 317 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 PWWP2BQ6NUJ5 590 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 NAPRTQ6XQN6 538 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 UNC5BQ8IZJ1 945 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 ZNF843Q8N446 348 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 EXTL1Q92935 676 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 ZNF501Q96CX3 271 aaPredicted RBP32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 PPM1MQ96MI6 270 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 CATSPER2Q96P56 530 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 PANX3Q96QZ0 392 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 TCF12Q99081 682 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 SOHLH2Q9NX45 425 aa32.04■■■□□ 2.72
SSSCA1-205ENST00000527920 PIEZO2Q9H5I5 2752 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 NDUFS3O75489 264 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 SLCO2B1O94956 709 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 TIAF1O95411 115 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 CYP4F2P78329 520 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 COL9A2Q14055 689 aaPredicted RBP32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 LY6DQ14210 128 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 TMED2Q15363 201 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 TBR1Q16650 682 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 TYSND1Q2T9J0 566 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 RNF187Q5TA31 235 aaPredicted RBP32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 SDCCAG8Q86SQ7 713 aaPredicted RBP32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 LKAAEAR1Q8TD35 194 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 XKR8Q9H6D3 395 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 ACTR10Q9NZ32 417 aa32.03■■■□□ 2.72
SSSCA1-205ENST00000527920 MAGEB16A2A368 324 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 SLC9B1P1A6NJY1 282 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 TERTO14746 1132 aaKnown RBP32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 KPNA5O15131 536 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 PFDN6O15212 129 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 ITGB6P18564 788 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 PAMP19021 973 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 HSPA14Q0VDF9 509 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 KCTD19Q17RG1 926 aaPredicted RBP32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 PTRHD1Q6GMV3 140 aaKnown RBP32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 KCND1Q9NSA2 647 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 IL17BQ9UHF5 180 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 PADI1Q9ULC6 663 aa32.02■■■□□ 2.72
SSSCA1-205ENST00000527920 IQCF5A8MTL0 148 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 AVILO75366 819 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 RPN2P04844 631 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 CCNYL3P0C7X3 344 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 TCP1P17987 556 aaKnown RBP32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 ADARP55265 1226 aaKnown RBP32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 FBXO38Q6PIJ6 1188 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 SPESP1Q6UW49 350 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 CES3Q6UWW8 571 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 UNC5DQ6UXZ4 953 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 UNC5AQ6ZN44 842 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 STARD8Q92502 1023 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 NRTNQ99748 197 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 SEMA4CQ9C0C4 833 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 FANCEQ9HB96 536 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 SAMD15Q9P1V8 674 aa32.01■■■□□ 2.71
SSSCA1-205ENST00000527920 FAM237BA0A1B0GVD1 139 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms