RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CPTPQ5TA50 214 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 C2CD4AQ8NCU7 369 aaPredicted RBP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC47A1Q96FL8 570 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 MCMBPQ9BTE3 642 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 NDEL1Q9GZM8 345 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ABCB8Q9NUT2 735 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 TBC1D14Q9P2M4 693 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
PCDHGA1-202ENST00000517417 ASNA1O43681 348 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 BEST1O76090 585 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TSPAN19P0C672 248 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CD68P34810 354 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 ACVRL1P37023 503 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 BUD31P41223 144 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 MCCD1P59942 119 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRAF3Q13114 568 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SIM2Q14190 667 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SPANXN2Q5MJ10 180 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 RSBN1Q5VWQ0 802 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TXNDC8Q6A555 127 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CAPN13Q6MZZ7 669 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PSRC1Q6PGN9 363 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PAQR3Q6TCH7 311 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 C17orf64Q86WR6 236 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 AADATQ8N5Z0 425 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SMOQ99835 787 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 OSBPL10Q9BXB5 764 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 NUAK2Q9H093 628 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PLAC1Q9HBJ0 212 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 IKZF3Q9UKT9 509 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 OGDHLQ9ULD0 1010 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 FOCADQ5VW36 1801 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SNAP29O95721 258 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 F2P00734 622 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 MLLT6P55198 1093 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SF1Q15637 639 aaKnown RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 DNAJB7Q7Z6W7 309 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CLEC14AQ86T13 490 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CAMKK1Q8N5S9 505 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 C19orf18Q8NEA5 215 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TMEM74Q96NL1 305 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 KCNA7Q96RP8 456 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PDE10AQ9Y233 779 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 PTGDR2Q9Y5Y4 395 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 A0A1B0GTW7 788 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SUV39H1O43463 412 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 NOBOXO60393 691 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 RSL1D1O76021 490 aaKnown RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 C1QAP02745 245 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 GNAO1P09471 354 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 ZNF26P17031 533 aaPredicted RBP10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 RXRGP48443 463 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CDC42P60953 191 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 CHIT1Q13231 466 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TRIM40Q6P9F5 258 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 GALNT5Q7Z7M9 940 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 KREMEN2Q8NCW0 462 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TCF25Q9BQ70 676 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 RASSF1Q9NS23 344 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 GIN1Q9NXP7 522 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 VPS4AQ9UN37 437 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 TLR6Q9Y2C9 796 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 SLC9A8Q9Y2E8 581 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 RNF11Q9Y3C5 154 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 COL4A5P29400 1685 aa10.65□□□□□ -0.7
PCDHGA1-202ENST00000517417 ATG13O75143 517 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 NIPSNAP2O75323 286 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 CLDN9O95484 217 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 DNTTP04053 509 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 BMP2P12643 396 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 ARSAP15289 507 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 ELK4P28324 431 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 GTF2E2P29084 291 aaKnown RBP10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALDH4A1P30038 563 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 DPP6P42658 865 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAGEA8P43361 318 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 BCAP31P51572 246 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 MTPNP58546 118 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 PURAQ00577 322 aaKnown RBP10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 SPIBQ01892 262 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 APOFQ13790 326 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 CEP78Q5JTW2 689 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 DEF8Q6ZN54 512 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 CARM1Q86X55 608 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 HIPK1Q86Z02 1210 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC15A3Q8IY34 581 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 XAGE5Q8WWM1 108 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCTD13Q8WZ19 329 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 PYCR2Q96C36 320 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 TIFAQ96CG3 184 aa10.65□□□□□ -0.71
PCDHGA1-202ENST00000517417 K7EPI3 171 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR10H2O60403 315 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 POP4O95707 220 aaKnown RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ENO2P09104 434 aaPredicted RBP10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 ALOX5P09917 674 aa10.64□□□□□ -0.71
PCDHGA1-202ENST00000517417 MYF6P23409 242 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms