RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FJX1Q86VR8 437 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 C1orf87Q8N0U7 546 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 GBGT1Q8N5D6 347 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 NRACQ8N912 160 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 SYN2Q92777 582 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TANKQ92844 425 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ABTB1Q969K4 478 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TEKT1Q969V4 418 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 CCDC47Q96A33 483 aaKnown RBP5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 MIB2Q96AX9 1013 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 BTBD10Q9BSF8 475 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ACAT2Q9BWD1 397 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM206Q9H813 350 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TUFT1Q9NNX1 390 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM30AQ9NV96 361 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 ACAD8Q9UKU7 415 aa5.08□□□□□ -1.6
HMGB1P3-201ENST00000502802 IGLV5-52A0A0A0MRZ9 124 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 LILRA5A6NI73 299 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 YDJCA8MPS7 323 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 HTATSF1O43719 755 aaKnown RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 KERAO60938 352 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 SLC22A3O75751 556 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 GCNT3O95395 438 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 IGHV2-70P01814 119 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 SNRNP70P08621 437 aaKnown RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 MYOD1P15172 320 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 POLR2CP19387 275 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 KCNJ1P48048 391 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 PLCD1P51178 756 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 UBASH3AP57075 661 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 PTENP60484 403 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 STX1BP61266 288 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ASIC1P78348 528 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 BNC1Q01954 994 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 RUNX1T1Q06455 604 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ACTN3Q08043 901 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF155Q12901 538 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 TRAF2Q12933 501 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 TWIST1Q15672 202 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 CALCRLQ16602 461 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 CCDC158Q5M9N0 1113 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 KLC3Q6P597 504 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF449Q6P9G9 518 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 SLC27A1Q6PCB7 646 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 GET4Q7L5D6 327 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMPRSS12Q86WS5 348 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 FAM114A1Q8IWE2 563 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 C4orf19Q8IY42 314 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ANKRD13CQ8N6S4 541 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 UXS1Q8NBZ7 420 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 FAM216AQ8WUB2 273 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 RAD54LQ92698 747 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 DAZLQ92904 295 aaKnown RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 ST6GALNAC6Q969X2 333 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 PHF21AQ96BD5 680 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 STAMBPL1Q96FJ0 436 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 CDHR1Q96JP9 859 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 SF3B5Q9BWJ5 86 aaKnown RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 MRIQ9BWK5 157 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 MINDY3Q9H8M7 445 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 MRPL44Q9H9J2 332 aaKnown RBP5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 Q9N2K0 584 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 MID1IP1Q9NPA3 183 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 PTGFRNQ9P2B2 879 aa5.07□□□□□ -1.6
HMGB1P3-201ENST00000502802 HYKKA2RU49 373 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 PPEF2O14830 753 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 KDM4BO94953 1096 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 PGLSO95336 258 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 GLUD1P00367 558 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 CSN3P07498 182 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 HOXC6P09630 235 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TIA1P31483 386 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 PSMC4P43686 418 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 GLUD2P49448 558 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SNU13P55769 128 aaKnown RBP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 ST8SIA6P61647 398 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TRAF3Q13114 568 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TNK1Q13470 666 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 CUL3Q13618 768 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 ZNF234Q14588 700 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TAZQ16635 292 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 FAM174BQ3ZCQ3 159 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 LRRC73Q5JTD7 316 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPOUT1Q5T280 376 aaKnown RBP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TRNP1Q6NT89 227 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SYCE2Q6PIF2 218 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 PLEKHM3Q6ZWE6 761 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMPRSS11BQ86T26 416 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 COMMD2Q86X83 199 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 PPFIBP2Q8ND30 876 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 DBF4BQ8NFT6 615 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 OR7G3Q8NG95 312 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPATA22Q8NHS9 363 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SLC20A1Q8WUM9 679 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 TMEM255BQ8WV15 326 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SSMEM1Q8WWF3 244 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 BSCL2Q96G97 398 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SCMH1Q96GD3 660 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SPATA33Q96N06 139 aa5.06□□□□□ -1.6
HMGB1P3-201ENST00000502802 SORCS2Q96PQ0 1159 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms