RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 DRD4P21917 467 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 KLRC2P26717 231 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACADLP28330 430 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CHRNA5P30532 468 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 AGTR2P50052 363 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRRX1P54821 245 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC37A1P57057 533 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CLDN2P57739 230 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SRP54P61011 504 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 HNRNPKP61978 463 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 OCA2Q04671 838 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 GRIK3Q13003 919 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 DDX39BQ13838 428 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 GIT2Q14161 759 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PTPRCAPQ14761 206 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZMYND11Q15326 602 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SMN1Q16637 294 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 HIST2H2ACQ16777 129 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ST3GAL2Q16842 350 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CD300EQ496F6 205 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCDC152Q4G0S7 254 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRRC23Q53EV4 343 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 LBHQ53QV2 105 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TEDDM1Q5T9Z0 273 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 NAIF1Q69YI7 327 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 DHRS7BQ6IAN0 325 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 WBP2NLQ6ICG8 309 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 LRRC8EQ6NSJ5 796 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARMC6Q6NXE6 501 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CASC4Q6P4E1 433 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 NOTUMQ6P988 496 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 KYAT3Q6YP21 454 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC39A5Q6ZMH5 540 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 DPY19L3Q6ZPD9 716 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TAS2R42Q7RTR8 314 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMPRSS9Q7Z410 1059 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PRSS42Q7Z5A4 293 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PIGWQ7Z7B1 504 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF573Q86YE8 665 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CAMK1DQ8IU85 385 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SYT12Q8IV01 421 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARID3BQ8IVW6 561 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADGRG5Q8IZF4 528 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 BBS5Q8N3I7 341 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF808Q8N4W9 903 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANKRD13CQ8N6S4 541 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 AMER2Q8N7J2 671 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 NIPA2Q8N8Q9 360 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR8K5Q8NH50 307 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 FEZF2Q8TBJ5 459 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ELP5Q8TE02 316 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TAS1R2Q8TE23 839 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SELENOMQ8WWX9 145 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC9A6Q92581 669 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM136AQ96C01 138 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 QRFPRQ96P65 431 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 BBS4Q96RK4 519 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 NAP1L3Q99457 506 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ASCL2Q99929 193 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCDC77Q9BR77 488 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 EHD1Q9H4M9 534 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 RMND5AQ9H871 391 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 SRD5A3Q9H8P0 318 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ECT2Q9H8V3 914 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 GLOD4Q9HC38 313 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ZNF304Q9HCX3 659 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ENTPD7Q9NQZ7 604 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PNPLA3Q9NST1 481 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TMEM248Q9NWD8 314 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR6C3Q9NZP0 311 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 PPP4R1LQ9P1A2 415 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 KCNN3Q9UGI6 736 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CHRNA9Q9UGM1 479 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ATP6V1HQ9UI12 483 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAD2L2Q9UI95 211 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 TRAF3IP3Q9Y228 551 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CHTOPQ9Y3Y2 248 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 LSM4Q9Y4Z0 139 aaKnown RBP4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 COL4A5P29400 1685 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 CHD4Q14839 1912 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARFGEF2Q9Y6D5 1785 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 LTBP1Q14766 1721 aa4.24□□□□□ -1.73
HMGB1P21-201ENST00000502313 NUP98P52948 1817 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 A0A087WZY1 265 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 GOLGA6L7A0A1B0GV03 622 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 C13orf42A0A1B0GVH6 325 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 MAGEA13PA6NCF6 341 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 H0YIV9 168 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 FOXS1O43638 330 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SURF6O75683 361 aaKnown RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 PLGP00747 810 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 SERPINC1P01008 464 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LIPFP07098 398 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 TPM1P09493 284 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 LINGO3P0C6S8 592 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 POLR2MP0CAP2 368 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 THRBP10828 461 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CSF2RAP15509 400 aa4.23□□□□□ -1.73
HMGB1P21-201ENST00000502313 CREB1P16220 341 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms