RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 LIN7AO14910 233 aaPredicted RBP16.84■□□□□ 0.29
HDAC11-220ENST00000498532 FTH1P02794 183 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
HDAC11-220ENST00000498532 RORAP35398 523 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 PGDP52209 483 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 CHAF1BQ13112 559 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 SYTL3Q4VX76 610 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 PLEKHS1Q5SXH7 462 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 HOOK3Q86VS8 718 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 ENDOVQ8N8Q3 282 aaKnown RBP16.84■□□□□ 0.29
HDAC11-220ENST00000498532 NRTNQ99748 197 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 DESI2Q9BSY9 194 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 KLHL25Q9H0H3 589 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 XKR8Q9H6D3 395 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 SPTBP11277 2137 aa16.84■□□□□ 0.29
HDAC11-220ENST00000498532 TCRBV7S2A1N4TA0A589 114 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 MROH6A6NGR9 719 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 GAS8O95995 478 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 PDGFAP04085 211 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 RAB40ALP0C0E4 278 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 PVRP15151 417 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 SHMT2P34897 504 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 MLLT10P55197 1068 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ITGA1P56199 1179 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ITIH4Q14624 930 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ZNF789Q5FWF6 425 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 SPESP1Q6UW49 350 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 PACS1Q6VY07 963 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ATCAYQ86WG3 371 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ADGRF3Q8IZF5 1079 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 DNAAF3Q8N9W5 541 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 OR5AR1Q8NGP9 310 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ELMO1Q92556 727 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDAC11-220ENST00000498532 TRAPPC9Q96Q05 1148 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 SLC25A23Q9BV35 468 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 NLNQ9BYT8 704 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ING2Q9H160 280 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 PCMTD2Q9NV79 361 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ACTR10Q9NZ32 417 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 SERTAD3Q9UJW9 196 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ICKQ9UPZ9 632 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 ASF1AQ9Y294 204 aa16.83■□□□□ 0.28
HDAC11-220ENST00000498532 RP1L1Q8IWN7 2480 aaPredicted RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 USP9XQ93008 2570 aaPredicted RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 OR51F1A6NGY5 319 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 ERI2A8K979 691 aaKnown RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 CYSRT1A8MQ03 144 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 E7EQ34 232 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 PTGIRP43119 386 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 CDH17Q12864 832 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 UBAP2LQ14157 1087 aaKnown RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 CCDC38Q502W7 563 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 LCN10Q6JVE6 187 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 CDHR3Q6ZTQ4 885 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 TMEM139Q8IV31 216 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 OR52K1Q8NGK4 314 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 ATG4AQ8WYN0 398 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 N4BP2L2Q92802 583 aaPredicted RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 MIB2Q96AX9 1013 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 HES6Q96HZ4 224 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 DPH2Q9BQC3 489 aaPredicted RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 TCFL5Q9UL49 500 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 PCDHGA9Q9Y5G4 932 aaKnown RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 PRSS21Q9Y6M0 314 aa16.82■□□□□ 0.28
HDAC11-220ENST00000498532 TNRC6AQ8NDV7 1962 aaKnown RBP16.82■□□□□ 0.28
HDAC11-220ENST00000498532 A0A0U1RQJ8 604 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 HEATR9A2RTY3 570 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 CCDC162PA2VCL2 907 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 C9J4A7 227 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 OR56A5P0C7T3 313 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 PSMA3P25788 255 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 FOXN2P32314 431 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 CCL11P51671 97 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 BRD3Q15059 726 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 NCF4Q15080 339 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 PTCHD3Q3KNS1 767 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 FAM198BQ6UWH4 519 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 TRIM73Q86UV7 250 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 GPR135Q8IZ08 494 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 C19orf47Q8N9M1 422 aaKnown RBP16.81■□□□□ 0.28
HDAC11-220ENST00000498532 ADAMTS17Q8TE56 1095 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 POLG2Q9UHN1 485 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 TDRKHQ9Y2W6 561 aaKnown RBP16.81■□□□□ 0.28
HDAC11-220ENST00000498532 CAPN6Q9Y6Q1 641 aa16.81■□□□□ 0.28
HDAC11-220ENST00000498532 USP9YO00507 2555 aaPredicted RBP16.81■□□□□ 0.28
HDAC11-220ENST00000498532 E7EVH7 732 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 F8W8V4 182 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 ZNF749O43361 778 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 TMEM63AO94886 807 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 IFNB1P01574 187 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 HBQ1P09105 142 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 UGT2B7P16662 529 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
HDAC11-220ENST00000498532 CD97P48960 835 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 PLOD1Q02809 727 aaPredicted RBP16.8■□□□□ 0.28
HDAC11-220ENST00000498532 SEL1L2Q5TEA6 688 aa16.8■□□□□ 0.28
HDAC11-220ENST00000498532 FAM69BQ5VUD6 431 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms