RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 AMIGO1Q86WK6 493 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 MFSD3Q96ES6 412 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 MED8Q96G25 268 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 OSBPL9Q96SU4 736 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 MRM3Q9HC36 420 aaKnown RBP24.25■■□□□ 1.47
HMGN1-217ENST00000489072 TRMT1Q9NXH9 659 aaKnown RBP24.25■■□□□ 1.47
HMGN1-217ENST00000489072 ANAPC5Q9UJX4 755 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 CDYLQ9Y232 598 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 ASF1AQ9Y294 204 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 BTRCQ9Y297 605 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 NEU2Q9Y3R4 380 aa24.25■■□□□ 1.47
HMGN1-217ENST00000489072 ZNF891A8MT65 544 aaPredicted RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 PGRMC1O00264 195 aaKnown RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 MATN2O00339 956 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 NKX2-8O15522 239 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 ZSCAN12O43309 604 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 AVILO75366 819 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 TMEM63AO94886 807 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 CDH3P22223 829 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 PRDX3P30048 256 aaKnown RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 PPARGP37231 505 aaPredicted RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 TTPAP49638 278 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 PLOD1Q02809 727 aaPredicted RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 VRK3Q8IV63 474 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 KRT222Q8N1A0 295 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 CPT1BQ92523 772 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 STAMBPL1Q96FJ0 436 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 CARD6Q9BX69 1037 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 C1GALT1Q9NS00 363 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 SOHLH2Q9NX45 425 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 SOX13Q9UN79 622 aa24.24■■□□□ 1.47
HMGN1-217ENST00000489072 MRPS18BQ9Y676 258 aaKnown RBP24.24■■□□□ 1.47
HMGN1-217ENST00000489072 PRMT5O14744 637 aaPredicted RBP24.23■■□□□ 1.47
HMGN1-217ENST00000489072 TERTO14746 1132 aaKnown RBP24.23■■□□□ 1.47
HMGN1-217ENST00000489072 TUBB4BP68371 445 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 TUBB2AQ13885 445 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 CCDC137Q6PK04 289 aaKnown RBP24.23■■□□□ 1.47
HMGN1-217ENST00000489072 CAND1Q86VP6 1230 aaKnown RBP24.23■■□□□ 1.47
HMGN1-217ENST00000489072 TBC1D21Q8IYX1 336 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 SLC22A15Q8IZD6 547 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 MPP5Q8N3R9 675 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 OR5K2Q8NHB8 316 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 ZNF501Q96CX3 271 aaPredicted RBP24.23■■□□□ 1.47
HMGN1-217ENST00000489072 FCRL4Q96PJ5 515 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 EFHD1Q9BUP0 239 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 TUBB2BQ9BVA1 445 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 PITPNM3Q9BZ71 974 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 P2RY12Q9H244 342 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 CROTQ9UKG9 612 aa24.23■■□□□ 1.47
HMGN1-217ENST00000489072 F8W8V4 182 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 GPC4O75487 556 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 VAPBO95292 243 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 FAM87AP0C7U9 286 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 ST6GAL1P15907 406 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 HSPA14Q0VDF9 509 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 BPHLQ86WA6 291 aaPredicted RBP24.22■■□□□ 1.47
HMGN1-217ENST00000489072 ACTRT1Q8TDG2 376 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 STARD8Q92502 1023 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 NAP1L3Q99457 506 aaPredicted RBP24.22■■□□□ 1.47
HMGN1-217ENST00000489072 ARHGAP9Q9BRR9 750 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 TRIM56Q9BRZ2 755 aaKnown RBP24.22■■□□□ 1.47
HMGN1-217ENST00000489072 ACTR10Q9NZ32 417 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 PLAGL1Q9UM63 463 aa24.22■■□□□ 1.47
HMGN1-217ENST00000489072 TDRKHQ9Y2W6 561 aaKnown RBP24.22■■□□□ 1.47
HMGN1-217ENST00000489072 SEC16AO15027 2179 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 C2orf74A8MZ97 194 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 GOLGA8KD6RF30 607 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 GOLGA8TH3BQL2 631 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 ZNF185O15231 689 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 NTRK1P04629 796 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 PRKAR1AP10644 381 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 PVRP15151 417 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 AOAHP28039 575 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 DLSTP36957 453 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 TMTC4Q5T4D3 741 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 UNC5AQ6ZN44 842 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 TSSK1BQ9BXA7 367 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 KLHL25Q9H0H3 589 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 AKIRIN1Q9H9L7 192 aaPredicted RBP24.21■■□□□ 1.47
HMGN1-217ENST00000489072 POLG2Q9UHN1 485 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 SNX12Q9UMY4 172 aa24.21■■□□□ 1.47
HMGN1-217ENST00000489072 BSNQ9UPA5 3926 aa24.2■■□□□ 1.47
HMGN1-217ENST00000489072 USP27XA6NNY8 438 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 KIF5CO60282 957 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 PHF2O75151 1096 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 RPS3P23396 243 aaKnown RBP eCLIP24.2■■□□□ 1.46
HMGN1-217ENST00000489072 SHMT2P34897 504 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 SARNPP82979 210 aaKnown RBP24.2■■□□□ 1.46
HMGN1-217ENST00000489072 CDC20Q12834 499 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 ATP1A1-AS1Q5TC04 95 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 ASZ1Q8WWH4 475 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 TRAPPC9Q96Q05 1148 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 TWSG1Q9GZX9 223 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 LHX9Q9NQ69 397 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 KCND1Q9NSA2 647 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 SPHK1Q9NYA1 384 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 PADI1Q9ULC6 663 aa24.2■■□□□ 1.46
HMGN1-217ENST00000489072 PIPSLA2A3N6 862 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 NDUFS3O75489 264 aa24.19■■□□□ 1.46
HMGN1-217ENST00000489072 MT-ND3P03897 115 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms