RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 PIAS3Q9Y6X2 628 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 MIA3Q5JRA6 1907 aa13.47□□□□□ -0.25
COPS7B-221ENST00000488111 C1orf232A0A0U1RR37 186 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 LDB2O43679 373 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 KDM1AO60341 852 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
COPS7B-221ENST00000488111 PON2Q15165 354 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 KCNJ8Q15842 424 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 HACD2Q6Y1H2 254 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 SPRED1Q7Z699 444 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 ATXN7L3BQ96GX2 97 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 FBXL20Q96IG2 436 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 ZNF347Q96SE7 839 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 CTRCQ99895 268 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 C9orf16Q9BUW7 83 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 C8orf4Q9NR00 106 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 AGPAT4Q9NRZ5 378 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 MRGBPQ9NV56 204 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 K7EQS6 105 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 TK2O00142 265 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 CLOCKO15516 846 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 SEC14L2O76054 403 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 ATP6V1B2P21281 511 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 TIE1P35590 1138 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 GSSP48637 474 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 NAGLUP54802 743 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 INAQ16352 499 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 TSTD2Q5T7W7 516 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 AGAP7PQ5VUJ5 663 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 FAM45BPQ6NSW5 357 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 TMEM214Q6NUQ4 689 aaKnown RBP13.46□□□□□ -0.25
COPS7B-221ENST00000488111 GDPD4Q6W3E5 623 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 GLT6D1Q7Z4J2 308 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 ZBTB46Q86UZ6 589 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 SLC7A5P1Q8MH63 180 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 STK40Q8N2I9 435 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 OR13C4Q8NGS5 318 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 FAM45AQ8TCE6 357 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 BRSK1Q8TDC3 778 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 PTCD2Q8WV60 388 aaKnown RBP13.46□□□□□ -0.25
COPS7B-221ENST00000488111 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 AGAP2Q99490 1192 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 PSME2Q9UL46 239 aa13.46□□□□□ -0.25
COPS7B-221ENST00000488111 TICRRQ7Z2Z1 1910 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 BPTFQ12830 3046 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 TRPC5OSA6NMA1 111 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 SOCS5O75159 536 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 RASAL1O95294 804 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 IDUAP35475 653 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 SQLEQ14534 574 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ZNF846Q147U1 533 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 NEDD8Q15843 81 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 HNRNPA1L2Q32P51 320 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 C9orf64Q5T6V5 341 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CHPFQ8IZ52 775 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 RAB2BQ8WUD1 216 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CPEB1Q9BZB8 566 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 TMEM245Q9H330 911 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 BPIFA1Q9NP55 256 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 THAP10Q9P2Z0 257 aaPredicted RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 IL36AQ9UHA7 158 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 GOLGA8CPA6NN73 597 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 TPD52L2O43399 206 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 JRKO75564 520 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 SRP72O76094 671 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 EGFP01133 1207 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 EPHX1P07099 455 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ALOX5P09917 674 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CD72P21854 359 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CAPGP40121 348 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ARSDP51689 593 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 METAP1P53582 386 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CSE1LP55060 971 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 TUBA3CQ13748 450 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 C2orf27AQ580R0 203 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 NUDT18Q6ZVK8 323 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ARL10Q8N8L6 244 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 STYXQ8WUJ0 223 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CYGBQ8WWM9 190 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 SLC45A3Q96JT2 553 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 IARS2Q9NSE4 1012 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 TREX1Q9NSU2 369 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 ERVK-11Q9UQG0 969 aa13.45□□□□□ -0.26
COPS7B-221ENST00000488111 FNDC3AQ9Y2H6 1198 aaKnown RBP13.45□□□□□ -0.26
COPS7B-221ENST00000488111 CROCCQ5TZA2 2017 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 AQP12BA6NM10 295 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 FAM47E-STBD1D6RA91 191 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 ACOX3O15254 700 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 CLIC3O95833 236 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 ARNTP27540 789 aa13.44□□□□□ -0.26
COPS7B-221ENST00000488111 HNF1BP35680 557 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms