RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 XKR8Q9H6D3 395 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 MRM3Q9HC36 420 aaKnown RBP10.86□□□□□ -0.67
CKS1B-206ENST00000474215 C1GALT1Q9NS00 363 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 SYBUQ9NX95 663 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 PADI1Q9ULC6 663 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 SNX12Q9UMY4 172 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 SOX13Q9UN79 622 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 NEU2Q9Y3R4 380 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 RPS6KL1Q9Y6S9 549 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 CFAP46Q8IYW2 2715 aa10.86□□□□□ -0.67
CKS1B-206ENST00000474215 MAGEB16A2A368 324 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF891A8MT65 544 aaPredicted RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 IQCF5A8MTL0 148 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 C2orf74A8MZ97 194 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 BTN3A1O00481 513 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CES2O00748 559 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 PRMT5O14744 637 aaPredicted RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 GPC4O75487 556 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 NDUFS3O75489 264 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TIAF1O95411 115 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MT-ND3P03897 115 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 APOA4P06727 396 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TPBGLP0DKB5 382 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MLNP12872 115 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ITGB6P18564 788 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ARNTP27540 789 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 AOAHP28039 575 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 SHMT2P34897 504 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CSE1LP55060 971 aaKnown RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TUBB4BP68371 445 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 HSPA14Q0VDF9 509 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TUBB2AQ13885 445 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 GPR19Q15760 415 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 DNAJC21Q5F1R6 531 aaKnown RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ANKRD22Q5VYY1 191 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 PTRHD1Q6GMV3 140 aaKnown RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MRNIPQ6NTE8 343 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CES3Q6UWW8 571 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 UNC5AQ6ZN44 842 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 SDCCAG8Q86SQ7 713 aaPredicted RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CAND1Q86VP6 1230 aaKnown RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 LRRC6Q86X45 466 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 SLC22A15Q8IZD6 547 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ADGRF3Q8IZF5 1079 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF843Q8N446 348 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 EXD3Q8N9H8 876 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MCUQ8NE86 351 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 OR8K5Q8NH50 307 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 OR5K2Q8NHB8 316 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CPT1BQ92523 772 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 RNF31Q96EP0 1072 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MFSD3Q96ES6 412 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 MED8Q96G25 268 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TCF12Q99081 682 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ARHGAP9Q9BRR9 750 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TUBB2BQ9BVA1 445 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 PITPNM3Q9BZ71 974 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 P2RY12Q9H244 342 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 KCND1Q9NSA2 647 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 SOHLH2Q9NX45 425 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 IL17BQ9UHF5 180 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 LNPEPQ9UIQ6 1025 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 ICKQ9UPZ9 632 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 CDYLQ9Y232 598 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 BTRCQ9Y297 605 aa10.85□□□□□ -0.67
CKS1B-206ENST00000474215 TDRKHQ9Y2W6 561 aaKnown RBP10.85□□□□□ -0.67
CKS1B-206ENST00000474215 GOLGA6L10A0A0M3HER8 536 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 PIPSLA2A3N6 862 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 SDR42E2A6NKP2 422 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 KPNA5O15131 536 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF185O15231 689 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 NKX2-8O15522 239 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 MAP3K7O43318 606 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 KDM1AO60341 852 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 PHF2O75151 1096 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 SLCO2B1O94956 709 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 NTRK1P04629 796 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 DLSTP36957 453 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 ABRQ12979 859 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 CASC4Q6P4E1 433 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 VRK3Q8IV63 474 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 KRT222Q8N1A0 295 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 LKAAEAR1Q8TD35 194 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 GRK7Q8WTQ7 553 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 ZNF501Q96CX3 271 aaPredicted RBP10.84□□□□□ -0.67
CKS1B-206ENST00000474215 PDLIM2Q96JY6 352 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 PANX3Q96QZ0 392 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 SEMA4CQ9C0C4 833 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 XAB2Q9HCS7 855 aaKnown RBP10.84□□□□□ -0.67
CKS1B-206ENST00000474215 ACTR10Q9NZ32 417 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 OR6C2Q9NZP2 312 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 SAMD15Q9P1V8 674 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 ATRXP46100 2492 aa10.84□□□□□ -0.67
CKS1B-206ENST00000474215 PIEZO2Q9H5I5 2752 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 GOLGA8MH3BSY2 632 aa10.83□□□□□ -0.68
CKS1B-206ENST00000474215 PFDN6O15212 129 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms