RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 FAM107BQ9H098 131 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 OR52A5Q9H2C5 316 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 EPB41L1Q9H4G0 881 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 XKR8Q9H6D3 395 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 UCK1Q9HA47 277 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 FBXO6Q9NRD1 293 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 HRASLS2Q9NWW9 162 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC39A1Q9NY26 324 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC24A2Q9UI40 661 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 PLAGL1Q9UM63 463 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 ASF1AQ9Y294 204 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CRYL1Q9Y2S2 319 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 COLEC10Q9Y6Z7 277 aa9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
RTFDC1-205ENST00000466260 CEP295Q9C0D2 2601 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 KLHL33A6NCF5 533 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 OR6C74A6NCV1 312 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SDR42E2A6NKP2 422 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 F8W8V4 182 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 PRMT5O14744 637 aaPredicted RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 LIN7AO14910 233 aaPredicted RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 NIPSNAP2O75323 286 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SEC31AO94979 1220 aaKnown RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 MLNP12872 115 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 NDUFS1P28331 727 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CCR7P32248 378 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CXADRP78310 365 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SH3BP2P78314 561 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 PRKAA1Q13131 559 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SRSF6Q13247 344 aaKnown RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CTBP1Q13363 440 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 ANKRD20A4Q4UJ75 823 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CTSL3PQ5NE16 218 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 TMEM164Q5U3C3 297 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 BROXQ5VW32 411 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF470Q6ECI4 717 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 MRNIPQ6NTE8 343 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SDCCAG8Q86SQ7 713 aaPredicted RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CLEC14AQ86T13 490 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 PDZD3Q86UT5 571 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 VRK3Q8IV63 474 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 DENND6AQ8IWF6 608 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 UNC5BQ8IZJ1 945 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 AGGF1Q8N302 714 aaeCLIP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 MCUQ8NE86 351 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 LCN9Q8WX39 176 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CAVIN3Q969G5 261 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 PPM1MQ96MI6 270 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 RUNDC3BQ96NL0 473 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 MAP3K3Q99759 626 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 TSSK1BQ9BXA7 367 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 DPH5Q9H2P9 285 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 KIR3DX1Q9H7L2 352 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CPNE5Q9HCH3 593 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 C20orf96Q9NUD7 363 aaPredicted RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 PCYOX1Q9UHG3 505 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 GNPTGQ9UJJ9 305 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 CHMP2BQ9UQN3 213 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 RUVBL2Q9Y230 463 aaKnown RBP9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 HEBP2Q9Y5Z4 205 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 B3GALT1Q9Y5Z6 326 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 USP24Q9UPU5 2620 aa9.48□□□□□ -0.89
RTFDC1-205ENST00000466260 ANKRD12Q6UB98 2062 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CACNA1BQ00975 2339 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 A0A087WV48 116 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC5A10A0PJK1 596 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 OR5K3A6NET4 321 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 E5RI56 91 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 BTN3A1O00481 513 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 C9P02748 559 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 APOA4P06727 396 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CDH3P22223 829 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SLC1A2P43004 574 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ARL4DP49703 201 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ITGA8P53708 1063 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 MPP1Q00013 466 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ABRQ12979 859 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CLN3Q13286 438 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CUL1Q13616 776 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 COL9A2Q14055 689 aaPredicted RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 KCNAB1Q14722 419 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 TMED2Q15363 201 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF658BQ4V348 819 aaPredicted RBP9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 MSS51Q4VC12 460 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ZNF789Q5FWF6 425 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 KLHL35Q6PF15 583 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CNSTQ6PJW8 725 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 IGF2-ASQ6U949 168 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 MAATS1Q7Z4T9 603 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 ARHGAP22Q7Z5H3 698 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 PCGF5Q86SE9 256 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 CROCCP2Q86T23 111 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 VASH2Q86V25 355 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 TAX1BP1Q86VP1 789 aa9.47□□□□□ -0.89
RTFDC1-205ENST00000466260 KCNMB4Q86W47 210 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms