RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TCRBV7S2A1N4TA0A589 114 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 H7C0S8 307 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 KLK3P07288 261 aaPredicted RBP15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 PDHA2P29803 388 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 RPS18P62269 152 aaKnown RBP15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 PRKG2Q13237 762 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 BRD3Q15059 726 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 CCDC38Q502W7 563 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 TMEM139Q8IV31 216 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 PHC3Q8NDX5 983 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 OR52E1Q8NGJ3 308 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 OR52K1Q8NGK4 314 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 CPT1CQ8TCG5 803 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 SEC14L1Q92503 715 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 ELMO1Q92556 727 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 ZNF501Q96CX3 271 aaPredicted RBP15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 CLIP3Q96DZ5 547 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 RUFY1Q96T51 708 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 MVB12BQ9H7P6 319 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 CASS4Q9NQ75 786 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 C1GALT1Q9NS00 363 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 IMPACTQ9P2X3 320 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 BTRCQ9Y297 605 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 PCDHGA6Q9Y5G7 932 aa15.29■□□□□ 0.04
CHCHD3-204ENST00000457942 TNRC6AQ8NDV7 1962 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 OR51F1A6NGY5 319 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TMEM150CB9EJG8 249 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 QSOX1O00391 747 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 BTN3A1O00481 513 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 AP2A2O94973 939 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 FTH1P02794 183 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 GSTM1P09488 218 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 CYP2A7P20853 494 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 PTPN4P29074 926 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 CDC25BP30305 580 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 NSG1P42857 185 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 CD151P48509 253 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 GSTM4Q03013 218 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 CDH17Q12864 832 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 RPA4Q13156 261 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 BOP1Q14137 746 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 PRR30Q53SZ7 412 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TCTN3Q6NUS6 607 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 AMIGO1Q86WK6 493 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 PIANPQ8IYJ0 282 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 CPT1BQ92523 772 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TFGQ92734 400 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 N4BP2L2Q92802 583 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TTC1Q99614 292 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 GPR87Q9BY21 358 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TSGA10Q9BZW7 698 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 KLHL25Q9H0H3 589 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 XKR8Q9H6D3 395 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 AKIRIN1Q9H9L7 192 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 LUZP4Q9P127 313 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 MAP10Q9P2G4 905 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 TLK1Q9UKI8 766 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 SRPK3Q9UPE1 567 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 ZNF148Q9UQR1 794 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 ASF1AQ9Y294 204 aa15.28■□□□□ 0.04
CHCHD3-204ENST00000457942 C2orf74A8MZ97 194 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 BTN3A3O00478 584 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 LIN7AO14910 233 aaPredicted RBP15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 OR56A5P0C7T3 313 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 SPTBP11277 2137 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 PRDX3P30048 256 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 FDFT1P37268 417 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 PMS2P54278 862 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 GSDMDP57764 484 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 CHAF1BQ13112 559 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 GPS2Q13227 327 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 ITIH4Q14624 930 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 NADK2Q4G0N4 442 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 SYVN1Q86TM6 617 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 CCDC89Q8N998 374 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 TFB2MQ9H5Q4 396 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 LATS2Q9NRM7 1088 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 GUCA1BQ9UMX6 200 aa15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 TDRKHQ9Y2W6 561 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-204ENST00000457942 ABCA12Q86UK0 2595 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 PRRC2CQ9Y520 2896 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 HEATR9A2RTY3 570 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 CCDC162PA2VCL2 907 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 ERI2A8K979 691 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 F8W8V4 182 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 LIASO43766 372 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 PVRP15151 417 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 ST6GAL1P15907 406 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 STIP1P31948 543 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 CSE1LP55060 971 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 ABRQ12979 859 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 SNX1Q13596 522 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 LAMB3Q13751 1172 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 CPZQ66K79 652 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 AFTPHQ6ULP2 937 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 GALNT11Q8NCW6 608 aa15.26■□□□□ 0.03
CHCHD3-204ENST00000457942 OR5AR1Q8NGP9 310 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms