RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 CPNE7Q9UBL6 633 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 ZNF70Q9UC06 446 aaPredicted RBP2.88□□□□□ -1.95
CHD9-203ENST00000447540 PCDHGA8Q9Y5G5 932 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 ADGRB1O14514 1584 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 GNG14A0A1W2PPG7 69 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 CASKO14936 926 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 APOC3P02656 99 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 FCER2P06734 321 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 RPS3P23396 243 aaKnown RBP eCLIP2.88□□□□□ -1.95
CHD9-203ENST00000447540 PCP4P48539 62 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 CBX2Q14781 532 aaPredicted RBP2.88□□□□□ -1.95
CHD9-203ENST00000447540 HSDL1Q3SXM5 330 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 ZIK1Q3SY52 487 aaPredicted RBP2.88□□□□□ -1.95
CHD9-203ENST00000447540 PMF1Q6P1K2 205 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 SPOCD1Q6ZMY3 1216 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 GPRIN3Q6ZVF9 776 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 DNAJC22Q8N4W6 341 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 LINC00471Q8N535 108 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 BEST4Q8NFU0 473 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 TMC2Q8TDI7 906 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 C1orf54Q8WWF1 131 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 MUL1Q969V5 352 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 WFIKKN1Q96NZ8 548 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 FTHL17Q9BXU8 183 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 IL1RL2Q9HB29 575 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 VAT1LQ9HCJ6 419 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 NIT2Q9NQR4 276 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 TBC1D22BQ9NU19 505 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 CNTN3Q9P232 1028 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 ERVK-18Q9QC07 812 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 PCDHAC2Q9Y5I4 1007 aa2.88□□□□□ -1.95
CHD9-203ENST00000447540 KLF2Q9Y5W3 355 aaPredicted RBP2.88□□□□□ -1.95
CHD9-203ENST00000447540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.88□□□□□ -1.95
CHD9-203ENST00000447540 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 PPLO60437 1756 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 A0A0A6YYH2 397 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 A6NJ64 397 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 PPEF2O14830 753 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 FOXN1O15353 648 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 FOXD2O60548 495 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 CILPO75339 1184 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 LGI1O95970 557 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 SLC2A2P11168 524 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 TPSB2P20231 275 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 CTNNB1P35222 781 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 MATKP42679 507 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 NDST2P52849 883 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 TBX4P57082 545 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 HTRA4P83105 476 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 ROR1Q01973 937 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 KEAP1Q14145 624 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 TPSAB1Q15661 275 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 SLC14A2Q15849 920 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 KIAA1324Q6UXG2 1013 aaKnown RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 DCXRQ7Z4W1 244 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 PTAR1Q7Z6K3 402 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 DPPA2Q7Z7J5 298 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 RFX6Q8HWS3 928 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 SMAP2Q8WU79 429 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 SLC47A1Q96FL8 570 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ZNF341Q9BYN7 854 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 RNF6Q9Y252 685 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 MFHAS1Q9Y4C4 1052 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 DAGLAQ9Y4D2 1042 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 BCL9LQ86UU0 1499 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 IGSF1Q8N6C5 1336 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 LNP1A1A4G5 178 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 SLC35F4A4IF30 521 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 MPTX1A8MV57 137 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 INPP4BO15327 924 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ATG13O75143 517 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 CYP11A1P05108 521 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 CD2P06729 351 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ACADLP28330 430 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ADH7P40394 386 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 GRIK4Q16099 956 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 FSCN1Q16658 493 aaKnown RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 ATP13A4Q4VNC1 1196 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 CDC73Q6P1J9 531 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 PAMR1Q6UXH9 720 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 DPH6Q7L8W6 267 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 NLRX1Q86UT6 975 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 COMMD7Q86VX2 200 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 IFI44Q8TCB0 444 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 WDFY2Q96P53 400 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 PKP2Q99959 881 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 ROGDIQ9GZN7 287 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 EXOSC4Q9NPD3 245 aaKnown RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 CHST12Q9NRB3 414 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 NUDT15Q9NV35 164 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 DNMT3LQ9UJW3 386 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 CORO2BQ9UQ03 480 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ACOT9Q9Y305 439 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 ACTL7AQ9Y615 435 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 IGSF9BQ9UPX0 1349 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 MED1Q15648 1581 aaPredicted RBP2.87□□□□□ -1.95
CHD9-203ENST00000447540 TCP10L2B9ZVM9 353 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 AIPO00170 330 aa2.87□□□□□ -1.95
CHD9-203ENST00000447540 SLC16A6O15403 523 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms