RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 CDKN2DP55273 166 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 ZFP36L1Q07352 338 aaKnown RBP14.42□□□□□ -0.1
TMEM248-204ENST00000424964 GBX1Q14549 363 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 KLHL38Q2WGJ6 581 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 KBTBD12Q3ZCT8 623 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 HECTD2Q5U5R9 776 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 FAM45BPQ6NSW5 357 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 ARMC6Q6NXE6 501 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 TTC23LQ6PF05 361 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 WDR74Q6RFH5 385 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-204ENST00000424964 UNC5DQ6UXZ4 953 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 ZC3HC1Q86WB0 502 aaKnown RBP14.42□□□□□ -0.1
TMEM248-204ENST00000424964 RELL1Q8IUW5 271 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 SPNS2Q8IVW8 549 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 SLITRK4Q8IW52 837 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 PPM1NQ8N819 430 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 OR52E1Q8NGJ3 308 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 OR5K2Q8NHB8 316 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 FAM45AQ8TCE6 357 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 CD200R1Q8TD46 325 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 RSC1A1Q92681 617 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 GRAMD1AQ96CP6 724 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 ELMO2Q96JJ3 720 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 TGM7Q96PF1 710 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 CPNE1Q99829 537 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 CDC42EP4Q9H3Q1 356 aaKnown RBP14.42□□□□□ -0.1
TMEM248-204ENST00000424964 SRMSQ9H3Y6 488 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 HRASLS2Q9NWW9 162 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 KLHL3Q9UH77 587 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 MED16Q9Y2X0 877 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 VWA7Q9Y334 891 aa14.42□□□□□ -0.1
TMEM248-204ENST00000424964 COL27A1Q8IZC6 1860 aaPredicted RBP14.42□□□□□ -0.1
TMEM248-204ENST00000424964 OR6C74A6NCV1 312 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 TRABD2BA6NFA1 517 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 CAPN5O15484 640 aaPredicted RBP14.41□□□□□ -0.1
TMEM248-204ENST00000424964 KDM1AO60341 852 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 ACSL3O95573 720 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 MCM3P25205 808 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 ATP5DP30049 168 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 CCKBRP32239 447 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 TUBB4BP68371 445 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 PDAP1Q13442 181 aaKnown RBP14.41□□□□□ -0.1
TMEM248-204ENST00000424964 SLMAPQ14BN4 828 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 IRGCQ6NXR0 463 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 FOXR1Q6PIV2 292 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 OOSP2Q86WS3 158 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 CPNE9Q8IYJ1 553 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 CCDC74BQ96LY2 380 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 RHOJQ9H4E5 214 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 TFB2MQ9H5Q4 396 aaKnown RBP14.41□□□□□ -0.1
TMEM248-204ENST00000424964 XKR8Q9H6D3 395 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 AKAP7Q9P0M2 348 aaPredicted RBP14.41□□□□□ -0.1
TMEM248-204ENST00000424964 PLAGL1Q9UM63 463 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 RUVBL2Q9Y230 463 aaKnown RBP14.41□□□□□ -0.1
TMEM248-204ENST00000424964 NFS1Q9Y697 457 aa14.41□□□□□ -0.1
TMEM248-204ENST00000424964 NCOR2Q9Y618 2525 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CCDC187A0A096LP49 1063 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 FAM95CA0A1B0GW59 222 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 OR5K3A6NET4 321 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CBSLP0DN79 551 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 ENO3P13929 434 aaPredicted RBP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 POLR2CP19387 275 aaPredicted RBP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CBSP35520 551 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 GP5P40197 560 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CAPZBP47756 277 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 RGS4P49798 205 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 GFERP55789 205 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 TIAL1Q01085 375 aaKnown RBP eCLIP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 PRKAA1Q13131 559 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CAMK2BQ13554 666 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 TRA2AQ13595 282 aaKnown RBP eCLIP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 C3orf38Q5JPI3 329 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 PAQR3Q6TCH7 311 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 NEK10Q6ZWH5 1172 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 AMIGO1Q86WK6 493 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 DCUN1D3Q8IWE4 304 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 RCBTB1Q8NDN9 531 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 MRRFQ96E11 262 aaKnown RBP14.4□□□□□ -0.1
TMEM248-204ENST00000424964 ZDHHC12Q96GR4 267 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 VPS39Q96JC1 886 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 NRTNQ99748 197 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 OLFM1Q99784 485 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 CIDEBQ9UHD4 219 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 AK5Q9Y6K8 562 aa14.4□□□□□ -0.1
TMEM248-204ENST00000424964 RASSF9O75901 435 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 MATN4O95460 622 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 C1orf105O95561 183 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 C1QAP02745 245 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 MPOP05164 745 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 FAM153BP0C7A2 387 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 MPC1LP0DKB6 136 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 THRAP10827 490 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 CD9P21926 228 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 FDXRP22570 491 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 SHMT2P34897 504 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 SPRP35270 261 aaPredicted RBP14.39□□□□□ -0.11
TMEM248-204ENST00000424964 CCNFP41002 786 aa14.39□□□□□ -0.11
TMEM248-204ENST00000424964 BDKRB1P46663 353 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms