RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KIF5CO60282 957 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 ZBTB11O95625 1053 aaPredicted RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 PVRP15151 417 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 PRDX3P30048 256 aaKnown RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 HSPA14Q0VDF9 509 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 AARS2Q5JTZ9 985 aaKnown RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 ACTRT1Q8TDG2 376 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 KIAA1143Q96AT1 154 aaPredicted RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 CARD6Q9BX69 1037 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 P2RY12Q9H244 342 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 TRIT1Q9H3H1 467 aaKnown RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 MRM3Q9HC36 420 aaKnown RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 SOHLH2Q9NX45 425 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 SNX12Q9UMY4 172 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 MRPS18BQ9Y676 258 aaKnown RBP25.53■■□□□ 1.68
VEGFA-207ENST00000413642 RPS6KL1Q9Y6S9 549 aa25.53■■□□□ 1.68
VEGFA-207ENST00000413642 PRMT5O14744 637 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-207ENST00000413642 ACY1Q03154 408 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 MAP7Q14244 749 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 UNC5AQ6ZN44 842 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 OTUD6BQ8N6M0 293 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 SLC45A3Q96JT2 553 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 NAP1L3Q99457 506 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-207ENST00000413642 AKIRIN1Q9H9L7 192 aaPredicted RBP25.52■■□□□ 1.68
VEGFA-207ENST00000413642 CIDEBQ9UHD4 219 aa25.52■■□□□ 1.68
VEGFA-207ENST00000413642 PHF2O75151 1096 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 NDUFS3O75489 264 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 NTRK1P04629 796 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 ST6GAL1P15907 406 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 PPARGP37231 505 aaPredicted RBP25.51■■□□□ 1.67
VEGFA-207ENST00000413642 TTPAP49638 278 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 ABRQ12979 859 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 PTRHD1Q6GMV3 140 aaKnown RBP25.51■■□□□ 1.67
VEGFA-207ENST00000413642 TRIM73Q86UV7 250 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 TBC1D21Q8IYX1 336 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 LMNTD1Q8N9Z9 388 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 STAMBPL1Q96FJ0 436 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 C1GALT1Q9NS00 363 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 SPHK1Q9NYA1 384 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 ACTR10Q9NZ32 417 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 IL1RAPL1Q9NZN1 696 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 CROTQ9UKG9 612 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 BTRCQ9Y297 605 aa25.51■■□□□ 1.67
VEGFA-207ENST00000413642 GPC4O75487 556 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 ITGB2P05107 769 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 F7P08709 466 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-207ENST00000413642 FAM87AP0C7U9 286 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 PRKAR1AP10644 381 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 AOAHP28039 575 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 C19orf57Q0VDD7 668 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 ATP1A1-AS1Q5TC04 95 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 PRAMEF17Q5VTA0 474 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 CASC4Q6P4E1 433 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 SLC22A15Q8IZD6 547 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 CFAP61Q8NHU2 1237 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 ZNF501Q96CX3 271 aaPredicted RBP25.5■■□□□ 1.67
VEGFA-207ENST00000413642 PDLIM2Q96JY6 352 aa25.5■■□□□ 1.67
VEGFA-207ENST00000413642 ZNF891A8MT65 544 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-207ENST00000413642 C2orf74A8MZ97 194 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 MATN2O00339 956 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 DLSTP36957 453 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 EIF3BP55884 814 aaKnown RBP25.49■■□□□ 1.67
VEGFA-207ENST00000413642 TUBB4BP68371 445 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 SARNPP82979 210 aaKnown RBP25.49■■□□□ 1.67
VEGFA-207ENST00000413642 PLOD1Q02809 727 aaPredicted RBP25.49■■□□□ 1.67
VEGFA-207ENST00000413642 TUBB2AQ13885 445 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 CTSL3PQ5NE16 218 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 TMTC4Q5T4D3 741 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 CARFQ8N187 725 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 AGGF1Q8N302 714 aaeCLIP25.49■■□□□ 1.67
VEGFA-207ENST00000413642 OR5K2Q8NHB8 316 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 MED8Q96G25 268 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 TRAPPC9Q96Q05 1148 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 ARHGAP9Q9BRR9 750 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 TUBB2BQ9BVA1 445 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 PITPNM3Q9BZ71 974 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 PYCARDQ9ULZ3 195 aa25.49■■□□□ 1.67
VEGFA-207ENST00000413642 F8W8V4 182 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 TERTO14746 1132 aaKnown RBP25.48■■□□□ 1.67
VEGFA-207ENST00000413642 FMO4P31512 558 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 SHMT2P34897 504 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 KIAA0930Q6ICG6 404 aaPredicted RBP25.48■■□□□ 1.67
VEGFA-207ENST00000413642 C16orf46Q6P387 395 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 FAM199XQ6PEV8 388 aaPredicted RBP25.48■■□□□ 1.67
VEGFA-207ENST00000413642 MCUQ8NE86 351 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 ASZ1Q8WWH4 475 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 STARD8Q92502 1023 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 SERPINB12Q96P63 405 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 RUFY1Q96T51 708 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 TSSK1BQ9BXA7 367 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 KCND1Q9NSA2 647 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 POLG2Q9UHN1 485 aa25.48■■□□□ 1.67
VEGFA-207ENST00000413642 PIPSLA2A3N6 862 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 APOA4P06727 396 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 CHRM5P08912 532 aaPredicted RBP25.47■■□□□ 1.67
VEGFA-207ENST00000413642 UGT2B7P16662 529 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 RPS3P23396 243 aaKnown RBP eCLIP25.47■■□□□ 1.671e-7■■□□□ 12.2
VEGFA-207ENST00000413642 OAS2P29728 719 aaKnown RBP25.47■■□□□ 1.67
VEGFA-207ENST00000413642 CYB5D1Q6P9G0 228 aa25.47■■□□□ 1.67
VEGFA-207ENST00000413642 BPHLQ86WA6 291 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms