RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 NECTIN3Q9NQS3 549 aa13.52□□□□□ -0.24
RUNX3-203ENST00000399916 RGS18Q9NS28 235 aa13.52□□□□□ -0.24
RUNX3-203ENST00000399916 ZNF490Q9ULM2 529 aaPredicted RBP13.52□□□□□ -0.24
RUNX3-203ENST00000399916 TMEM5Q9Y2B1 443 aa13.52□□□□□ -0.24
RUNX3-203ENST00000399916 GSTK1Q9Y2Q3 226 aa13.52□□□□□ -0.24
RUNX3-203ENST00000399916 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 UMPSP11172 480 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 CPB1P15086 417 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 DPP6P42658 865 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 SLAMF1Q13291 335 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.25
RUNX3-203ENST00000399916 SMCO1Q147U7 214 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 SURF1Q15526 300 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 AP5B1Q2VPB7 878 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 GADL1Q6ZQY3 521 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 C15orf39Q6ZRI6 1047 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ANKRD46Q86W74 232 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 XYLT1Q86Y38 959 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 NME4O00746 187 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 SGTAO43765 313 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 LRATO95237 230 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 LTA4HP09960 611 aaKnown RBP13.52□□□□□ -0.25
RUNX3-203ENST00000399916 FSHRP23945 695 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 POLR2JP52435 117 aaKnown RBP13.52□□□□□ -0.25
RUNX3-203ENST00000399916 DGKQP52824 942 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ITGA1P56199 1179 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 CDH17Q12864 832 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 AQP6Q13520 282 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 SMN1Q16637 294 aaKnown RBP13.52□□□□□ -0.25
RUNX3-203ENST00000399916 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 MEIOBQ8N635 442 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 CEP76Q8TAP6 659 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ROPN1LQ96C74 230 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ZFP3Q96NJ6 502 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 C12orf57Q99622 126 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 DHRS4Q9BTZ2 278 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 HAPLN2Q9GZV7 340 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 VRTNQ9H8Y1 702 aa13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ARID1BQ8NFD5 2236 aaPredicted RBP13.52□□□□□ -0.25
RUNX3-203ENST00000399916 ARFGEF1Q9Y6D6 1849 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 IFRD1O00458 451 aaPredicted RBP13.51□□□□□ -0.25
RUNX3-203ENST00000399916 KIAA0513O60268 411 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 GPC1P35052 558 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 MAGEA2P43356 314 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 TAS2R39P59534 338 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 GPR85P60893 370 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ERVK-25P63136 954 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 KCNJ11Q14654 390 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
RUNX3-203ENST00000399916 COLGALT2Q8IYK4 626 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ARFGAP1Q8N6T3 406 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PORCNQ9H237 461 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 RNF19AQ9NV58 838 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 CMTM6Q9NX76 183 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 DNAJB9Q9UBS3 223 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 GMDSO60547 372 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 KPNA6O60684 536 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PTPN2P17706 415 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 CAPSQ13938 189 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PNCKQ6P2M8 343 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PTCHD4Q6ZW05 846 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 GALNT13Q8IUC8 556 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ATPAF2Q8N5M1 289 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 TMEM176AQ96HP8 235 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ERMAPQ96PL5 475 aaPredicted RBP13.51□□□□□ -0.25
RUNX3-203ENST00000399916 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 OR51E2Q9H255 320 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ACAD9Q9H845 621 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
RUNX3-203ENST00000399916 CYB5R1Q9UHQ9 305 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 TSPAN16Q9UKR8 245 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 NCKAP1Q9Y2A7 1128 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 RRN3P2A6NIE6 340 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 SDHDO14521 159 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 CRHBPP24387 322 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PRKCHP24723 683 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 RPL38P63173 70 aaKnown RBP13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 ALG1LQ6GMV1 187 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 SSX6Q7RTT6 188 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 SIGLEC10Q96LC7 697 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 RBCK1Q9BYM8 510 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 FBXO5Q9UKT4 447 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 CDH7Q9ULB5 785 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
RUNX3-203ENST00000399916 A0A1W2PQ09 198 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 PRMT5O14744 637 aaPredicted RBP13.5□□□□□ -0.25
RUNX3-203ENST00000399916 CYP2A6P11509 494 aaPredicted RBP13.5□□□□□ -0.25
RUNX3-203ENST00000399916 NFKB1P19838 968 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 RPS12P25398 132 aaKnown RBP13.5□□□□□ -0.25
RUNX3-203ENST00000399916 BRCC3P46736 316 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 GALK2Q01415 458 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 LRRC26Q2I0M4 334 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 FAM160B1Q5W0V3 765 aa13.5□□□□□ -0.25
RUNX3-203ENST00000399916 CASP12Q6UXS9 341 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms