RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ICMTO60725 284 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 CAPN15O75808 1086 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 C9P02748 559 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 PGRP06401 933 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 PCSK6P29122 969 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 GMFBP60983 142 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 POM121L1PQ3SYA9 428 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 DOK6Q6PKX4 331 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 SVOPLQ8N434 492 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 MEIOBQ8N635 442 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 STON2Q8WXE9 905 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 FCGR1BQ92637 280 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 EMID1Q96A84 441 aaPredicted RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 GTPBP2Q9BX10 602 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 TMEM138Q9NPI0 162 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.24■□□□□ 0.032e-8■□□□□ 8.3
SRPK1-201ENST00000346162 MFHAS1Q9Y4C4 1052 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 CSF2P04141 144 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 MAPKAPK2P49137 400 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 IL10RBQ08334 325 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 LRP8Q14114 963 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 FBXO48Q5FWF7 155 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF613Q6PF04 617 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 B3GNT9Q6UX72 402 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 LINGO4Q6UY18 593 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 DCP2Q8IU60 420 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 TWIST2Q8WVJ9 160 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 UPF1Q92900 1129 aaKnown RBP eCLIP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 FUBP3Q96I24 572 aaKnown RBP eCLIP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 MKRN2Q9H000 416 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 RPF2Q9H7B2 306 aaKnown RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 AMBNQ9NP70 447 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 SLC9A3R1O14745 358 aaPredicted RBP15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ARL4DP49703 201 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 CYP20A1Q6UW02 462 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 SPATA19Q7Z5L4 167 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 RACGAP1Q9H0H5 632 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 MMP27Q9H306 513 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ANKHQ9HCJ1 492 aa15.24■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF701M0R085 212 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SLC1A2P43004 574 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 PPP5CP53041 499 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ALDH16A1Q8IZ83 802 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 DCBLD1Q8N8Z6 715 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 MUS81Q96NY9 551 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ERMAPQ96PL5 475 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 CNPPD1Q9BV87 410 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 C1QTNF1Q9BXJ1 281 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SOX17Q9H6I2 414 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SNTG1Q9NSN8 517 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 A0A1B0GVM2 712 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 TCAF2A6NFQ2 919 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ADH1AP07327 375 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 FAM163BP0C2L3 166 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ELK4P28324 431 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 GDI2P50395 445 aaKnown RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 FBXW4P57775 412 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 RPS7P62081 194 aaKnown RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 EFR3AQ14156 821 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SF3B4Q15427 424 aaKnown RBP eCLIP15.23■□□□□ 0.034e-7■■■■□ 22.9
SRPK1-201ENST00000346162 MEP1AQ16819 746 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 TIGD6Q17RP2 521 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 XKRXQ6PP77 449 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 OSTM1Q86WC4 334 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 CADM2Q8N3J6 435 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 NPLOC4Q8TAT6 608 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 THG1LQ9NWX6 298 aaKnown RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 IRS2Q9Y4H2 1338 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 CCDC88AQ3V6T2 1871 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 CHURC1-FNTBB4DL54 471 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 XPNPEP2O43895 674 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 GOT2P00505 430 aaKnown RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 F2P00734 622 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 GSTM5P46439 218 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 HCAR3P49019 387 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF792Q3KQV3 632 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 CERS6Q6ZMG9 384 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF614Q8N883 585 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF671Q8TAW3 534 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF431Q8TF32 576 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SUSD6Q92537 303 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 VRTNQ9H8Y1 702 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 MAT2BQ9NZL9 334 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ALDH1A2O94788 518 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 EOMESO95936 686 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 FUCA1P04066 466 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SDC2P34741 201 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF45Q02386 682 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SGCGQ13326 291 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 ZNF181Q2M3W8 571 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 C11orf24Q96F05 449 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 PIWIL1Q96J94 861 aaKnown RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SIGLEC10Q96LC7 697 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 OR52E6Q96RD3 313 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 RAD18Q9NS91 495 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 PDP1Q9P0J1 537 aaPredicted RBP15.23■□□□□ 0.03
SRPK1-201ENST00000346162 SIRPGQ9P1W8 387 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
SRPK1-201ENST00000346162 KMOO15229 486 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms