RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CATSPER2Q96P56 530 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 PANX3Q96QZ0 392 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 OSBPL9Q96SU4 736 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 MAP3K3Q99759 626 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 TUBB2BQ9BVA1 445 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 FANCEQ9HB96 536 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 XAB2Q9HCS7 855 aaKnown RBP12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 C1GALT1Q9NS00 363 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 GNPTGQ9UJJ9 305 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 POMT2Q9UKY4 750 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 SOX13Q9UN79 622 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 ASF1AQ9Y294 204 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 BTRCQ9Y297 605 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 VPS9D1Q9Y2B5 631 aa12.96□□□□□ -0.33
SIRPB3P-201ENST00000340424 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 KPNA5O15131 536 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 PHF2O75151 1096 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 APOA4P06727 396 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 CCNYL3P0C7X3 344 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 SFTPCP11686 197 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 LIFP15018 202 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 POLR2CP19387 275 aaPredicted RBP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 RPS3P23396 243 aaKnown RBP eCLIP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 MGAT1P26572 445 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 ACADLP28330 430 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 STAT5AP42229 794 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 KPNA2P52292 529 aaKnown RBP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 C19orf57Q0VDD7 668 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 KIAA1614Q5VZ46 1190 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 PCSK4Q6UW60 755 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 C6orf15Q6UXA7 325 aaPredicted RBP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 SDCCAG8Q86SQ7 713 aaPredicted RBP12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLC22A15Q8IZD6 547 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 OR5K2Q8NHB8 316 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 TCF12Q99081 682 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 PITPNM3Q9BZ71 974 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 FAM117AQ9C073 453 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 LATS2Q9NRM7 1088 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 KCND1Q9NSA2 647 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 SAMD15Q9P1V8 674 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 MRFAP1Q9Y605 127 aa12.95□□□□□ -0.34
SIRPB3P-201ENST00000340424 GSAPA4D1B5 854 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 H3BMM5 538 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 GPC4O75487 556 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 NDUFS3O75489 264 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SPAG6O75602 509 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 KIAA0754O94854 1291 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 CDH3P22223 829 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 PRDX3P30048 256 aaKnown RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 ADARP55265 1226 aaKnown RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 CRADDP78560 199 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SRSF6Q13247 344 aaKnown RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SEMA3AQ14563 771 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 TRIP13Q15645 432 aaPredicted RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 PTRHD1Q6GMV3 140 aaKnown RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 UNC5DQ6UXZ4 953 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 TIPARPQ7Z3E1 657 aaKnown RBP12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 GSDMBQ8TAX9 411 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 CPT1BQ92523 772 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 MED8Q96G25 268 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 ARHGAP9Q9BRR9 750 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 HGH1Q9BTY7 390 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLC12A9Q9BXP2 914 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 FGF21Q9NSA1 209 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SOHLH2Q9NX45 425 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 SYBUQ9NX95 663 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 LNPEPQ9UIQ6 1025 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 KCND3Q9UK17 655 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 NEU2Q9Y3R4 380 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 RPS6KL1Q9Y6S9 549 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 ATRXP46100 2492 aa12.94□□□□□ -0.34
SIRPB3P-201ENST00000340424 FAM237BA0A1B0GVD1 139 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 TCRBV7S3A2A0A539 114 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 SDR42E2A6NKP2 422 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 C21orf140B9A014 251 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 BTN3A1O00481 513 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 CPNE3O75131 537 aaKnown RBP12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLCO2B1O94956 709 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 VAPBO95292 243 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 EBLN1P0CF75 366 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 FOLR1P15328 257 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 WT1P19544 449 aaPredicted RBP12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 OGNP20774 298 aaKnown RBP12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 AOAHP28039 575 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 NMBRP28336 390 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 CCR7P32248 378 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 VPS41P49754 854 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 HSPA14Q0VDF9 509 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 TYSND1Q2T9J0 566 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 HOOK3Q86VS8 718 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 ADGRF3Q8IZF5 1079 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms