RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 MPP7Q5T2T1 576 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF626Q68DY1 528 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 PAPD4Q6PIY7 484 aaKnown RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 PPP1R21Q6ZMI0 780 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CENPVQ7Z7K6 275 aaPredicted RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 ZC3HC1Q86WB0 502 aaKnown RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 SLC4A11Q8NBS3 891 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 SLC16A11Q8NCK7 471 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 SDR42E1Q8WUS8 393 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 MOAP1Q96BY2 351 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 ZFYVE19Q96K21 471 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 TSPY26PQ9H489 355 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 LY9Q9HBG7 655 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 CD209Q9NNX6 404 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 KRCC1Q9NPI7 259 aaPredicted RBP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 AATFQ9NY61 560 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMCO3-201ENST00000316048 TUBE1Q9UJT0 475 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 GTF3C4Q9UKN8 822 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 ACSL5Q9ULC5 683 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 INSL5Q9Y5Q6 135 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 POMT1Q9Y6A1 747 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 C4AP0C0L4 1744 aa3.96□□□□□ -1.78
SMCO3-201ENST00000316048 NEDD4P46934 1319 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TRAV34A0A0B4J273 112 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 EDDM13A0A1B0GTR0 161 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TMEM189-UBE2V1I3L0A0 370 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SOCS6O14544 535 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 RANBP6O60518 1105 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CELA2AP08217 269 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CD58P19256 250 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 HRH2P25021 359 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 AZGP1P25311 298 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 LMO1P25800 156 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 BDKRB2P30411 391 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 GABRA5P31644 462 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ME1P48163 572 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CSNK2A1P68400 391 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 AKAP17AQ02040 695 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 PPATQ06203 517 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CCDC173Q0VFZ6 552 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 UBE2V1Q13404 147 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 PTGR1Q14914 329 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CBWD6Q4V339 395 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SBK1Q52WX2 424 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 DCAF6Q58WW2 860 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CBWD3Q5JTY5 395 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ALS2CLQ60I27 953 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 DHRS7BQ6IAN0 325 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 FAM173BQ6P4H8 233 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CTR9Q6PD62 1173 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 INTS8Q75QN2 995 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 EPHX4Q8IUS5 362 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CSNK2A3Q8NEV1 391 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 OR10S1Q8NGN2 331 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 PRSS3P2Q8NHM4 247 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TBC1D16Q8TBP0 767 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SLC25A28Q96A46 364 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TRIM44Q96DX7 344 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 GBP5Q96PP8 586 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CMKLR1Q99788 373 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SPRTNQ9H040 489 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 MMP27Q9H306 513 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TBC1D17Q9HA65 648 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TUBA8Q9NY65 449 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ATP6V0A2Q9Y487 856 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 TAF1P21675 1872 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 MYO5AQ9Y4I1 1855 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 UBR3Q6ZT12 1888 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 A0A1B0GVT2 93 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 FEZF1A0PJY2 475 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 GAGE12JA6NER3 117 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 MS4A18H0YCH9 400 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ZNF217O75362 1048 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 RECQL5O94762 991 aaPredicted RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SOX30O94993 753 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 DEXIO95424 95 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 FYNP06241 537 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ARSBP15848 533 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 KELP23276 732 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 BFSP1Q12934 665 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 GRIK2Q13002 908 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 MEP1AQ16819 746 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 KLHL26Q53HC5 615 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 COLEC12Q5KU26 742 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 LCN10Q6JVE6 187 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 DLK2Q6UY11 383 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CCAR2Q8N163 923 aaKnown RBP3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CAMKVQ8NCB2 501 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 SLC44A1Q8WWI5 657 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 VMP1Q96GC9 406 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CSF3RQ99062 836 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 ABHD6Q9BV23 337 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 COA1Q9GZY4 146 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 RAD21L1Q9H4I0 556 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 WDR26Q9H7D7 661 aa3.95□□□□□ -1.78
SMCO3-201ENST00000316048 CATSPERBQ9H7T0 1116 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms