RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NPY2RP49146 381 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TUBB4BP68371 445 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 PRAMEP78395 509 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 CDK16Q00536 496 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 CDC20Q12834 499 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TUBB2AQ13885 445 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 GRB7Q14451 532 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 BRD3Q15059 726 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TRIP13Q15645 432 aaPredicted RBP19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 FASTKD1Q53R41 847 aaKnown RBP19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 ATP1A1-AS1Q5TC04 95 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 COG1Q8WTW3 980 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 MFSD3Q96ES6 412 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 RUFY1Q96T51 708 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 TUBB2BQ9BVA1 445 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 CARD6Q9BX69 1037 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 MRM3Q9HC36 420 aaKnown RBP19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 PDE7BQ9NP56 450 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 LHX9Q9NQ69 397 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 HOMER3Q9NSC5 361 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 CATSPERZQ9NTU4 200 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 LNPEPQ9UIQ6 1025 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 MED13Q9UHV7 2174 aa19.22■□□□□ 0.67
PDZRN3-202ENST00000308537 B8ZZF3 427 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 MATN2O00339 956 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 FURINP09958 794 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 MSL3P1P0C860 447 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 PVRP15151 417 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 PEBP1P30086 187 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 ABRQ12979 859 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 KRT33BQ14525 404 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 PRAMEF17Q5VTA0 474 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 CES3Q6UWW8 571 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 CAND1Q86VP6 1230 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 BPHLQ86WA6 291 aaPredicted RBP19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 AMIGO1Q86WK6 493 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 TBC1D21Q8IYX1 336 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 SLC22A15Q8IZD6 547 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 OR5K2Q8NHB8 316 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 CPT1BQ92523 772 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 TRAPPC9Q96Q05 1148 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 TRIM56Q9BRZ2 755 aaKnown RBP19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 EFHD1Q9BUP0 239 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 LATS2Q9NRM7 1088 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 PCDHGA6Q9Y5G7 932 aa19.21■□□□□ 0.67
PDZRN3-202ENST00000308537 H3BMH7 237 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 PRMT5O14744 637 aaPredicted RBP19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 CD3EAPO15446 510 aaKnown RBP19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 HCRTR1O43613 425 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 AVILO75366 819 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 NTRK1P04629 796 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 DLSTP36957 453 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 GABRA4P48169 554 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 BORAQ6PGQ7 559 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 UNC5AQ6ZN44 842 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 GSTA5Q7RTV2 222 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 KRT222Q8N1A0 295 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 AGGF1Q8N302 714 aaeCLIP19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 SLC35F6Q8N357 371 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 MPP5Q8N3R9 675 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 CT55Q8WUE5 264 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 KIAA1143Q96AT1 154 aaPredicted RBP19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 STAMBPL1Q96FJ0 436 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 PBKQ96KB5 322 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 GEMIN8Q9NWZ8 242 aaKnown RBP19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 SPHK1Q9NYA1 384 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 ACTR10Q9NZ32 417 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 BFARQ9NZS9 450 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 SOX13Q9UN79 622 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 ASF1AQ9Y294 204 aa19.2■□□□□ 0.66
PDZRN3-202ENST00000308537 NBASA2RRP1 2371 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 GSAPA4D1B5 854 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 SLCO2B1O94956 709 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 PRKAR1AP10644 381 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 CDH3P22223 829 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 RPS3P23396 243 aaKnown RBP eCLIP19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 AOAHP28039 575 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 COILP38432 576 aaPredicted RBP19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 VPS41P49754 854 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 PLOD1Q02809 727 aaPredicted RBP19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 PRKAA1Q13131 559 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 GPS2Q13227 327 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 ZIC1Q15915 447 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 TYSND1Q2T9J0 566 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 CTSL3PQ5NE16 218 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 ARMC6Q6NXE6 501 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 CYB5D1Q6P9G0 228 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 OR1L3Q8NH93 324 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 BIRC8Q96P09 236 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 OR2A14Q96R47 310 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 FAM60AQ9NP50 221 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 KCND1Q9NSA2 647 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 PADI1Q9ULC6 663 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 PLAGL1Q9UM63 463 aa19.19■□□□□ 0.66
PDZRN3-202ENST00000308537 KRT14P02533 472 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 UGT2B7P16662 529 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 RORAP35398 523 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 MAGEA3P43357 314 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 TTPAP49638 278 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms