RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ITGB6P18564 788 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 MSH3P20585 1137 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 HMOX2P30519 316 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 GKP32189 559 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CCR2P41597 374 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CASP2P42575 452 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 RANBP1P43487 201 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 EPHA5P54756 1037 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 OR4D2P58180 307 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CHRNA6Q15825 494 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CMTM8Q8IZV2 173 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 NXPE1Q8N323 547 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 DCBLD1Q8N8Z6 715 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 LKAAEAR1Q8TD35 194 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 MAGEE2Q8TD90 523 aaPredicted RBP21.76■■□□□ 1.07
CCDC9-201ENST00000221922 C17orf80Q9BSJ5 609 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 BDH2Q9BUT1 245 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 OSBPL6Q9BZF3 934 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 SMG9Q9H0W8 520 aaKnown RBP21.76■■□□□ 1.07
CCDC9-201ENST00000221922 IPPKQ9H8X2 491 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CXorf21Q9HAI6 301 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 TSR3Q9UJK0 312 aaKnown RBP21.76■■□□□ 1.07
CCDC9-201ENST00000221922 HS3ST2Q9Y278 367 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 PRSS21Q9Y6M0 314 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 H0YAE9 185 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 IFRD1O00458 451 aaPredicted RBP21.75■■□□□ 1.07
CCDC9-201ENST00000221922 FGF19O95750 216 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 SRCP12931 536 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 DDX6P26196 483 aaKnown RBP eCLIP21.75■■□□□ 1.073e-12■■■■■ 48.7
CCDC9-201ENST00000221922 TBC1D25Q3MII6 688 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 GPRC6AQ5T6X5 926 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 SULT1C3Q6IMI6 304 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 SLC2A7Q6PXP3 512 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 SFRP1Q8N474 314 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 CCDC97Q96F63 343 aaPredicted RBP21.75■■□□□ 1.07
CCDC9-201ENST00000221922 NSUN3Q9H649 340 aaKnown RBP21.75■■□□□ 1.07
CCDC9-201ENST00000221922 MAGEL2Q9UJ55 1249 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 SNAP29O95721 258 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 CDH1P12830 882 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 UGT1A1P22309 533 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 UGT1A4P22310 534 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 DCKP27707 260 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 UGT1A3P35503 534 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 UGT1A5P35504 534 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 ERVFC1P60507 584 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 TRAF3Q13114 568 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 PMS2P3Q13401 168 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 PYCR3Q53H96 274 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 MILR1Q7Z6M3 343 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 CROCCP3Q8IVE0 287 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 OFCC1Q8IZS5 231 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 CLDN19Q8N6F1 224 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 PHF12Q96QT6 1004 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 EGFL8Q99944 293 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 ZNHIT2Q9UHR6 403 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 CDC14AQ9UNH5 594 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 ANGPTL3Q9Y5C1 460 aa21.75■■□□□ 1.07
CCDC9-201ENST00000221922 PRSS23O95084 383 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 FGBP02675 491 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 HLA-FP30511 346 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 CA5AP35218 305 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 NR6A1Q15406 480 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 C18orf21Q32NC0 220 aaPredicted RBP21.74■■□□□ 1.07
CCDC9-201ENST00000221922 GLYATQ6IB77 296 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 TBPL2Q6SJ96 375 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 TPRG1Q6ZUI0 275 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 RTL10Q7L3V2 364 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 RNF217Q8TC41 542 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 UBTD2Q8WUN7 234 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 VOPP1Q96AW1 172 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 PPP3R2Q96LZ3 170 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 NSMCE2Q96MF7 247 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 SEPHS2Q99611 448 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 NTN4Q9HB63 628 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 RDH14Q9HBH5 336 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 LATS2Q9NRM7 1088 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 HCFC1R1Q9NWW0 138 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 WWOXQ9NZC7 414 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 KLHL42Q9P2K6 505 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 CCL26Q9Y258 94 aa21.74■■□□□ 1.07
CCDC9-201ENST00000221922 AGAP14A8MT82 685 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 TULP3O75386 442 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 GUCA1CO95843 209 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 CBSLP0DN79 551 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 CBSP35520 551 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 NSG1P42857 185 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 HSPA7P48741 367 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 HTR6P50406 440 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 MYBPC3Q14896 1274 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 CCNYL2Q5T2Q4 361 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 C22orf39Q6P5X5 142 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 RNF165Q6ZSG1 346 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 USP45Q70EL2 814 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 MRPL43Q8N983 215 aaKnown RBP21.73■■□□□ 1.07
CCDC9-201ENST00000221922 TERB1Q8NA31 727 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 VPS50Q96JG6 964 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 RNF145Q96MT1 663 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 CD244Q9BZW8 370 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ACTL8Q9H568 366 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 PLGRKTQ9HBL7 147 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms