RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SLC35F5Q8WV83 523 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 CELF1Q92879 486 aaKnown RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 MND1Q9BWT6 205 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 OSBPL11Q9BXB4 747 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 RBCK1Q9BYM8 510 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 DNAJB11Q9UBS4 358 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 GP5P40197 560 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 MYBPHQ13203 477 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 ZDHHC13Q8IUH4 622 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 GPR137CQ8N3F9 429 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 ATAD1Q8NBU5 361 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 RXFP2Q8WXD0 754 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 CENPNQ96H22 339 aaPredicted RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 C8orf33Q9H7E9 229 aaPredicted RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 KLC4Q9NSK0 619 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 ATXN2Q99700 1313 aaKnown RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 CLCA1A8K7I4 914 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 ITGA10O75578 1167 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 RAB36O95755 333 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 IFNA5P01569 189 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 LPOP22079 712 aaPredicted RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 NIPAL4Q0D2K0 466 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 MAPK7Q13164 816 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 TMPRSS11BQ86T26 416 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 CORO2AQ92828 525 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 ZFRQ96KR1 1074 aaKnown RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 C7orf50Q9BRJ6 194 aaKnown RBP3.4□□□□□ -1.87
NEB-201ENST00000172853 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
NEB-201ENST00000172853 TNS3Q68CZ2 1445 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CDK12Q9NYV4 1490 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 PCP4L1A6NKN8 68 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 FFAR2O15552 330 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AHSGP02765 367 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PTPN6P29350 595 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 BMI1P35226 326 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ITSN1Q15811 1721 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ARHGAP31Q2M1Z3 1444 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 INTS6LQ5JSJ4 861 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 LRRC66Q68CR7 880 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 OR56B2PQ8NGI1 322 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RFKQ969G6 155 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CPNE1Q99829 537 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AP4B1Q9Y6B7 739 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 COMMD3-BMI1R4GMX3 469 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 KHNYNO15037 678 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 FGFR4P22455 802 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CLCNKAP51800 687 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RRADP55042 308 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CD47Q08722 323 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GDF6Q6KF10 455 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 HMBOX1Q6NT76 420 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PAMR1Q6UXH9 720 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ADAMTSL2Q86TH1 951 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SPATA22Q8NHS9 363 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 STK32AQ8WU08 396 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ANKRD7Q92527 254 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SHCBP1LQ9BZQ2 653 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TMEM39BQ9GZU3 492 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 IL32P24001 234 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CCND1P24385 295 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RPL22P35268 128 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 GRIA2P42262 883 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SEPHS1P49903 392 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 MCL1Q07820 350 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HEPACAMQ14CZ8 416 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 AADACL4Q5VUY2 407 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RDH11Q8TC12 318 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RHBDD1Q8TEB9 315 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 SLC38A4Q969I6 547 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 EAF2Q96CJ1 260 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ACTRT3Q9BYD9 372 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PLEKHA6Q9Y2H5 1048 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PRELID3BQ9Y3B1 194 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 ALG5Q9Y673 324 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PREX1Q8TCU6 1659 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 GGT3PA6NGU5 568 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 TOR1AO14656 332 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CLDN11O75508 207 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CDK14O94921 469 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PLEKP08567 350 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 IL7RP16871 459 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 OTX2P32243 289 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 RAB13P51153 203 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PTPN5P54829 565 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CYP4F8P98187 520 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PTPN20Q4JDL3 420 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CPTPQ5TA50 214 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CELF5Q8N6W0 485 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 ZNF578Q96N58 590 aaPredicted RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 MAPKAP1Q9BPZ7 522 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 NOP16Q9Y3C1 178 aaKnown RBP3.39□□□□□ -1.87
NEB-201ENST00000172853 TLL2Q9Y6L7 1015 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 CACNA1FO60840 1977 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 D6RAR5 112 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 PIGNO95427 931 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 HOXA9P31269 272 aa3.39□□□□□ -1.87
NEB-201ENST00000172853 APLNRP35414 380 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms