RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Fam43bA2AM80 330 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Syndig1A2ANU3 258 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 4930402K13RikB1AW18 415 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm8897L7N294 181 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Serpinb9eO08806 377 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 NapsaO09043 419 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cma1P21844 247 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 DckP43346 260 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Mapkapk2P49138 386 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Btg3P50615 252 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Kir3dl1P83555 432 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 CtscP97821 462 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 MafkQ61827 156 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vps72Q62481 368 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc2a12Q8BFW9 622 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Echs1Q8BH95 290 aaKnown RBP10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tigd4Q8BUZ3 513 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Q8CDN1 933 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zcchc9Q8R1J3 271 aaKnown RBP10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Atg10Q8R1P4 215 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Stx19Q8R1Q0 292 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cnot11Q9CWN7 505 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vsig1Q9D2J4 407 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dusp6Q9DBB1 381 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 SisF8VQM5 1818 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm6509A0A0J9YUV1 481 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Klhdc7bA0A286YD60 1263 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm6351K9J7D1 481 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Bcl7cO08664 217 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 DbtP53395 482 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prss36Q5K2P8 849 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 GstcdQ5RL51 634 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Runx1t1Q61909 577 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Itga2Q62469 1178 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dlx3Q64205 287 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Foxb2Q64733 428 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 ScapQ6GQT6 1276 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 KdsrQ6GV12 332 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Shkbp1Q6P7W2 704 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Plekha6Q7TQG1 1173 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prap1Q80XD8 149 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Prickle2Q80Y24 845 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trmt10aQ8C1Z8 328 aaKnown RBP10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fam221bQ8C627 487 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cacnb2Q8CC27 655 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp2j9Q924D1 502 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gmpr2Q99L27 348 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 ArhgdiaQ99PT1 204 aaKnown RBP10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tomm70Q9CZW5 611 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Timm50Q9D880 353 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Krt81Q9ERE2 481 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fkbp1bQ9Z2I2 108 aa10.7□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm16494E9Q2Z4 87 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 CenpcP49452 906 aaKnown RBP10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pitx1P70314 315 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Bcap31Q61335 245 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Jak3Q62137 1100 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 PtprjQ64455 1238 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Tha1Q6XPS7 400 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr834Q7TRG8 312 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 FicdQ8BIX9 458 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slc43a1Q8BSM7 564 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Slco3a1Q8R3L5 710 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 SelenomQ8VHC3 145 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Zswim7Q9CWQ2 152 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 2010109A12RikQ9D875 119 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp3a41aQ9JMA7 504 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Coro1bQ9WUM3 484 aaKnown RBP10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 PrebQ9WUQ2 417 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Trip11E9Q512 1976 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr1160A2AVT0 319 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nfkb1P25799 971 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Itgb7P26011 806 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Erp29P57759 262 aaKnown RBP10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gjb5Q02739 271 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fads2p1Q0VAX3 487 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ipcef1Q5DU31 406 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Lemd2Q6DVA0 511 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Olfr690Q8VH18 315 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Pcdhb8Q91XZ2 779 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Stard13Q923Q2 1113 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nos1apQ9D3A8 503 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Clec2gQ9D676 269 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Il18rapQ9Z2B1 614 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm42688A0A0R3P9D1 673 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Ankle1A8VU90 534 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Armc4B2RY50 1037 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Gm7535F7CXE4 302 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r21K7N6Y7 853 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Vmn2r20L7N2B1 853 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Oaz2O08608 189 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Angpt2O35608 496 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Hmox2O70252 315 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 BgnP28653 369 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 RabggtbP53612 339 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Cyp2a12P56593 492 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Dpf3P58269 378 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 PtpaP58389 323 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Nr4a2Q06219 598 aa10.69□□□□□ -0.7
Msh3-201ENSMUST00000022220 Fubp3Q3TIX6 575 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms