RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 LAPTM4BQ86VI4 370 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TRPM4Q8TD43 1214 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ADAD1Q96M93 576 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 GDF3Q9NR23 364 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TESMINQ9Y4I5 508 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 SCGB2A1O75556 95 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 IFNW1P05000 195 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 FGF1P05230 155 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MSR1P21757 451 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 RBM34P42696 430 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 GBX2P52951 348 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 NR1H2P55055 460 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 BOLLQ8N9W6 283 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 BAP1Q92560 729 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 DNAJC18Q9H819 358 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ANXA4P09525 319 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TACSTD2P09758 323 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 IRF2P14316 349 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF8P17098 575 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 KIR3DL1P43629 444 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 GTF2H2Q13888 395 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 GTF2H2CQ6P1K8 395 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 DCLRE1AQ6PJP8 1040 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 FAM92BQ6ZTR7 304 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 DEFB119Q8N690 84 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TIFAQ96CG3 184 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 NDC1Q9BTX1 674 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 RAP2CQ9Y3L5 183 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 NCBP2P52298 156 aaKnown RBP eCLIP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 SIM2Q14190 667 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 RBM39Q14498 530 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 SCGB1C1Q8TD33 95 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 PLA2G12BQ9BX93 195 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 NIFKQ9BYG3 293 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MTMR10Q9NXD2 777 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 CYTH4Q9UIA0 394 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 PCDHB3Q9Y5E6 796 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 CASP6P55212 293 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 FBXO48Q5FWF7 155 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 UBXN11Q5T124 520 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF676Q8N7Q3 588 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MRM3Q9HC36 420 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TBC1D14Q9P2M4 693 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 hCG_2039718K7EN88 272 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MSI1O43347 362 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 CPNE6O95741 557 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ITGA2BP08514 1039 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 LRRC73Q5JTD7 316 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MLIPQ5VWP3 458 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 JAGN1Q8N5M9 183 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 PLA2G15Q8NCC3 412 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 OR4K2Q8NGD2 314 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 CYP2W1Q8TAV3 490 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 TTPALQ9BTX7 342 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 SNRNP25Q9BV90 132 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MYH13Q9UKX3 1938 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 DAPL1A0PJW8 107 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 SASH3O75995 380 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TLE2Q04725 743 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TARDBPQ13148 414 aaKnown RBP eCLIP17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 C6orf52Q5T4I8 152 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 SCGB3A2Q96PL1 93 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 CDT1Q9H211 546 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TAS2R7Q9NYW3 318 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 ERVW-1Q9UQF0 538 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 APOL3O95236 402 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF35P13682 527 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 SPAM1P38567 509 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 BLKP51451 505 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 HERV-K104P61576 105 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TIGD2Q4W5G0 525 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 GPR139Q6DWJ6 353 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 YIPF4Q9BSR8 244 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 PCDHGC3Q9UN70 934 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 MAN2B2Q9Y2E5 1009 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TGFB2P61812 414 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 PCBP2Q15366 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 PCDHGB7Q9Y5F8 929 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 JCADQ9P266 1359 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 RFX5P48382 616 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 TMED4Q7Z7H5 227 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF398Q8TD17 642 aa17.27■□□□□ 0.36
CACNA1A-225ENST00000636389 EDNRAP25101 427 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 ITGA7Q13683 1181 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 GPR68Q15743 365 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 OR4K17Q8NGC6 315 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 PCDH18Q9HCL0 1135 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 CTPS2Q9NRF8 586 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 COMMD3Q9UBI1 195 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 ABCG2Q9UNQ0 655 aa17.27■□□□□ 0.35
CACNA1A-225ENST00000636389 PCDHGA10Q9Y5H3 936 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms