RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 CTPS1P17812 591 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 HTR7P34969 479 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 SEMG2Q02383 582 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 CYP4F3Q08477 520 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 TWF1Q12792 350 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 PWP1Q13610 501 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 TYSND1Q2T9J0 566 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 MBOAT1Q6ZNC8 495 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 NKAPQ8N5F7 415 aaKnown RBP15.5■□□□□ 0.07
NPHP4-211ENST00000622020 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 RPL3LQ92901 407 aaKnown RBP15.5■□□□□ 0.07
NPHP4-211ENST00000622020 CORO1BQ9BR76 489 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 UGT2B28Q9BY64 529 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 MIR1-1HGQ9H1L0 117 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 NLE1Q9NVX2 485 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-211ENST00000622020 SLC25A37Q9NYZ2 338 aa15.5■□□□□ 0.07
NPHP4-211ENST00000622020 FAM92AA1XBS5 289 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 SOBPA7XYQ1 873 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 CXCR6O00574 342 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 KDM1AO60341 852 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 PRAMEF11O60813 436 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TULP3O75386 442 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 SEC22BO75396 215 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 LRATO95237 230 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 FADS2O95864 444 aaKnown RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ZNF140P52738 457 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 LDLRAD1Q5T700 205 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 LIX1Q8N485 282 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 LEMD2Q8NC56 503 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 OR6K2Q8NGY2 324 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 MCOLN3Q8TDD5 553 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 GPN2Q9H9Y4 310 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ANGPTL3Q9Y5C1 460 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 IQCA1LA6NCM1 817 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 OR7A17O14581 309 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 STX7O15400 261 aaKnown RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 PRAMEF12O95522 483 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TRIM32Q13049 653 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 GTF2H2Q13888 395 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 INAQ16352 499 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 CTF1Q16619 201 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ADPRMQ3LIE5 342 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 GTF2H2CQ6P1K8 395 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TMEM53Q6P2H8 277 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 AFTPHQ6ULP2 937 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 NECAB2Q7Z6G3 386 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 PSD4Q8NDX1 1056 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TSPEARQ8WU66 669 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 HDAC2Q92769 488 aaKnown RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ZNF347Q96SE7 839 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 NUSAP1Q9BXS6 441 aaKnown RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 C8orf4Q9NR00 106 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 DNAJB9Q9UBS3 223 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 VPS51Q9UID3 782 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 NEUROG3Q9Y4Z2 214 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 FNDC1Q4ZHG4 1894 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ELOVL7A1L3X0 281 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TRIM64BA6NI03 449 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 H0Y626 953 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 M0QZQ0 153 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 TRIM16O95361 564 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 CYP11A1P05108 521 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 EPHA2P29317 976 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 ISL1P61371 349 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 RBM48Q5RL73 367 aaKnown RBP15.49■□□□□ 0.07
NPHP4-211ENST00000622020 CADM3Q8N126 398 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 DPY30Q9C005 99 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 PRM3Q9NNZ6 103 aa15.49■□□□□ 0.07
NPHP4-211ENST00000622020 JUNBP17275 347 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 DCTP40126 519 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 PPP2R2BQ00005 443 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 PON2Q15165 354 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 TRIP4Q15650 581 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 ADCK1Q86TW2 530 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 GTF2H4Q92759 462 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 OR52E6Q96RD3 313 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 BOCQ9BWV1 1114 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 NACA2Q9H009 215 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 KLHL25Q9H0H3 589 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 POPDC3Q9HBV1 291 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 VNN3Q9NY84 501 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 SEPT3Q9UH03 358 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 ZFP37Q9Y6Q3 630 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 KPNA4O00629 521 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 STX16O14662 325 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 ANGPTL1O95841 491 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 PRLP01236 227 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 EFNA1P20827 205 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 SLC6A4P31645 630 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 ZNF548Q8NEK5 533 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 TADA1Q96BN2 335 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 KATNAL1Q9BW62 490 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 AFF4Q9UHB7 1163 aaKnown RBP15.48■□□□□ 0.07
NPHP4-211ENST00000622020 SCML2Q9UQR0 700 aa15.48■□□□□ 0.07
NPHP4-211ENST00000622020 ZNF99A8MXY4 864 aaPredicted RBP15.47■□□□□ 0.07
NPHP4-211ENST00000622020 hCG_2039718K7EN88 272 aa15.47■□□□□ 0.07
NPHP4-211ENST00000622020 BCKDKO14874 412 aa15.47■□□□□ 0.07
NPHP4-211ENST00000622020 SLC13A2Q13183 592 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms