RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SOX9P48436 509 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 ATP4BP51164 291 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CCNG1P51959 295 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 SEC13P55735 322 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 DLX2Q07687 328 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CNTN1Q12860 1018 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CDC16Q13042 620 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 FASTKQ14296 549 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 GRB7Q14451 532 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 GBX1Q14549 363 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 KPNB1Q14974 876 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 MAPRE2Q15555 327 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 KIF19Q2TAC6 998 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 AGKQ53H12 422 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 C6orf163Q5TEZ5 329 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 FAM46CQ5VWP2 391 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 RAET1GQ6H3X3 334 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 C16orf89Q6UX73 402 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 MBOAT1Q6ZNC8 495 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 LARP4Q71RC2 724 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 MTSS1LQ765P7 747 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 ZNF765Q7L2R6 523 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CYP2U1Q7Z449 544 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 NET1Q7Z628 596 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 PHYKPLQ8IUZ5 450 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 VRK3Q8IV63 474 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 BEND7Q8N7W2 519 aaPredicted RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CDYL2Q8N8U2 506 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 RASGEF1AQ8N9B8 481 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 DLG3Q92796 817 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 ATP6V1E2Q96A05 226 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 TUBGCP3Q96CW5 907 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 RPP25Q9BUL9 199 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 TRIM54Q9BYV2 358 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 TUBB1Q9H4B7 451 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 RDH14Q9HBH5 336 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 FBRSL1Q9HCM7 1045 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 MRGBPQ9NV56 204 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 OPTCQ9UBM4 332 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 FAM8A1Q9UBU6 413 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 POLG2Q9UHN1 485 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 HCN2Q9UL51 889 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 STON1Q9Y6Q2 735 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CROCCQ5TZA2 2017 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 BRWD1Q9NSI6 2320 aa8.59□□□□□ -1.03
SMAD4-206ENST00000588860 CACNA1GO43497 2377 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 MYO10Q9HD67 2058 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SPTBN4Q9H254 2564 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 K7EPI3 171 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 AREL1O15033 823 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SLC16A5O15375 505 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 TSPAN6O43657 245 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SGTAO43765 313 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ATG13O75143 517 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ENTPD5O75356 428 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 KATNA1O75449 491 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PDE5AO76074 875 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 RECQL5O94762 991 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-206ENST00000588860 OTCP00480 354 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 LMNAP02545 664 aaKnown RBP8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ANXA5P08758 320 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
SMAD4-206ENST00000588860 LBPP18428 481 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CYP2A7P20853 494 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CCND1P24385 295 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 HMOX2P30519 316 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 P2RY2P41231 377 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 GPR1P46091 355 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 NME5P56597 212 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ERVPABLB-1P60509 514 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CREB5Q02930 508 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 TBL3Q12788 808 aaKnown RBP8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SP140Q13342 867 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ART3Q13508 389 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PTK2BQ14289 1009 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 TCHHL1Q5QJ38 904 aaPredicted RBP8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF787Q6DD87 383 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 LETMD1Q6P1Q0 360 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SCIMPQ6UWF3 145 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 NEK10Q6ZWH5 1172 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 TRIM74Q86UV6 250 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CACUL1Q86Y37 369 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CHPFQ8IZ52 775 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 DEFB107AQ8IZN7 70 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 TCAIMQ8N3R3 496 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 DCBLD1Q8N8Z6 715 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 SNX31Q8N9S9 440 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 KYQ8NBH2 561 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 OR4F6Q8NGB9 312 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 OR52B6Q8NGF0 335 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CSGALNACT1Q8TDX6 532 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 STMN2Q93045 179 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 RHBDF1Q96CC6 855 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 PHOX2BQ99453 314 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CCM2Q9BSQ5 444 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 CD244Q9BZW8 370 aa8.58□□□□□ -1.04
SMAD4-206ENST00000588860 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms