RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 KCTD5Q9NXV2 234 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 DPP7Q9UHL4 492 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SLC27A5Q9Y2P5 690 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 H0YJX3 145 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SLC28A2O43868 658 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SNAP29O95721 258 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CHRM5P08912 532 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 RPIAP49247 311 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CXCR3P49682 368 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 TUBA1BP68363 451 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 TUBA1AQ71U36 451 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 TRIM48Q8IWZ4 208 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 MEIOBQ8N635 442 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 INTS7Q9NVH2 962 aaKnown RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SEPT4O43236 478 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 GABBR2O75899 941 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 ALDH1A2O94788 518 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 GNA13Q14344 377 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 BHLHB9Q6PI77 547 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 USP30Q70CQ3 517 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 LRRC20Q8TCA0 184 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 PSMG2Q969U7 264 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 BCO2Q9BYV7 579 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SOX17Q9H6I2 414 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 ZFYVE1Q9HBF4 777 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CDC14AQ9UNH5 594 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 PTPRJQ12913 1337 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 FAM92AA1XBS5 289 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 MYBPHLA2RUH7 354 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 M0QX08 132 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SDHDO14521 159 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 ACOX3O15254 700 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CKBP12277 381 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 ELK4P28324 431 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 GCNT6Q5T4J0 391 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 FAM20CQ8IXL6 584 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SGK2Q9HBY8 427 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CCM2LQ9NUG4 571 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 C22orf31O95567 290 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 YES1P07947 543 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ZBTB2Q8N680 514 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 OR6K2Q8NGY2 324 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CDK15Q96Q40 435 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ITPAQ9BY32 194 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 COMMD9Q9P000 198 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MAP10Q9P2G4 905 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 SLC2A6Q9UGQ3 507 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 KPNA3O00505 521 aaPredicted RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 RPN2P04844 631 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ETV4P43268 484 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 RABGGTBP53611 331 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 VBP1P61758 197 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 UFM1P61960 85 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MTAPQ13126 283 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CRHR2Q13324 411 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 LAPTM5Q13571 262 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 PIK3R6Q5UE93 754 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 LIN54Q6MZP7 749 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 SNX27Q96L92 541 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 SLC22A4Q9H015 551 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 RNF38Q9H0F5 515 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 EHD1Q9H4M9 534 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MIOSQ9NXC5 875 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MOCS1Q9NZB8 636 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 BAZ2AQ9UIF9 1905 aaKnown RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 AP3D1O14617 1153 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CA12O43570 354 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 TBL1XO60907 577 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CCL14Q16627 93 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ARMC6Q6NXE6 501 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ANKRA2Q9H9E1 313 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MRPL17Q9NRX2 175 aaKnown RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 SEC14L3Q9UDX4 400 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 GIMAP2Q9UG22 337 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 H7C0S8 307 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 ESR1P03372 595 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 DHRS4L1P0CG22 281 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CXCR2P25025 360 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 STARP49675 285 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 RORCP51449 518 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MANFP55145 182 aaKnown RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 CACNG1Q06432 222 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 PPP1R3AQ16821 1122 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 DNAJB8Q8NHS0 232 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 TRUB1Q8WWH5 349 aaKnown RBP19.05■□□□□ 0.64
SUDS3-204ENST00000543473 TUBA1CQ9BQE3 449 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 GALPQ9UBC7 116 aa19.05■□□□□ 0.64
SUDS3-204ENST00000543473 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 TRPM3Q9HCF6 1732 aaPredicted RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 AURKAO14965 403 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ERN1O75460 977 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ANXA4P09525 319 aaPredicted RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 PRKCZQ05513 592 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 SUZ12Q15022 739 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 PDE12Q6L8Q7 609 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 RASSF6Q6ZTQ3 369 aa19.04■□□□□ 0.64
SUDS3-204ENST00000543473 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 TXNDC5Q8NBS9 432 aaKnown RBP19.04■□□□□ 0.64
SUDS3-204ENST00000543473 GRIN3AQ8TCU5 1115 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms