RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 FLAD1Q8NFF5 587 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 OR6P1Q8NGX9 317 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 OR2T11Q8NH01 316 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ZFYVE19Q96K21 471 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 RIPOR3Q96MK2 946 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 COLEC11Q9BWP8 271 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ATXN3LQ9H3M9 355 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ARNT2Q9HBZ2 717 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 RPRD1BQ9NQG5 326 aaKnown RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 TRMT13Q9NUP7 481 aaKnown RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 PAQR5Q9NXK6 330 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 RNF112Q9ULX5 631 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 PKP3Q9Y446 797 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 NEUROG3Q9Y4Z2 214 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 SNX10Q9Y5X0 201 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 LYVE1Q9Y5Y7 322 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 COL4A5P29400 1685 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 A0A1B0GTL3 188 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 HMX3A6NHT5 357 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ZSCAN5BA6NJL1 495 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 C19orf81C9J6K1 198 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 RECQL5O94762 991 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 RPLP0P05388 317 aaKnown RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 LIPAP38571 399 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 MAGEA11P43364 429 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 NRIP1P48552 1158 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 HMGCS2P54868 508 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 WNT3AP56704 352 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 DAOAP59103 153 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 CSNK2BP67870 215 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 PPP1R8Q12972 351 aaKnown RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 SIM2Q14190 667 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 GBX1Q14549 363 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 TBCEQ15813 527 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 ZBTB6Q15916 424 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 TIGD7Q6NT04 549 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 KDELC2Q7Z4H8 507 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 GPR149Q86SP6 731 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 SYVN1Q86TM6 617 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 CCDC28AQ8IWP9 274 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ELMOD2Q8IZ81 293 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 APPL2Q8NEU8 664 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 STAG3L4Q8TBR4 150 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 NCLNQ969V3 563 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 KIAA1191Q96A73 305 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 TBC1D20Q96BZ9 403 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ZNF419Q96HQ0 510 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 GDF15Q99988 308 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 ULBP1Q9BZM6 244 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 TKTL2Q9H0I9 626 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 WDCPQ9H6R7 721 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 DIABLOQ9NR28 239 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 DCAF13Q9NV06 445 aaKnown RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 EVLQ9UI08 416 aaPredicted RBP9.56□□□□□ -0.88
TCF4-208ENST00000543082 SNX6Q9UNH7 406 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 AKT3Q9Y243 479 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
TCF4-208ENST00000543082 STX16O14662 325 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CD3EAPO15446 510 aaKnown RBP9.55□□□□□ -0.88
TCF4-208ENST00000543082 MAFKO60675 156 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 UBL4AP11441 157 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CYP4B1P13584 511 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 ITGA2P17301 1181 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CHRNA5P30532 468 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CXCR3P49682 368 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 PON2Q15165 354 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 PCSK7Q16549 785 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RBBP7Q16576 425 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 SYT16Q17RD7 645 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 PROX2Q3B8N5 592 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 TBRG1Q3YBR2 411 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CELF3Q5SZQ8 465 aaKnown RBP9.55□□□□□ -0.88
TCF4-208ENST00000543082 KDELC1Q6UW63 502 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.55□□□□□ -0.88
TCF4-208ENST00000543082 AHSA2Q719I0 299 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 LDB1Q86U70 411 aaPredicted RBP9.55□□□□□ -0.88
TCF4-208ENST00000543082 TSPYL5Q86VY4 417 aaPredicted RBP9.55□□□□□ -0.88
TCF4-208ENST00000543082 ARHGAP12Q8IWW6 846 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 PAF1Q8N7H5 531 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 OR10A6Q8NH74 314 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 ITCHQ96J02 903 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RNF170Q96K19 258 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 DMRTB1Q96MA1 342 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RHNO1Q9BSD3 238 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 C1QTNF3Q9BXJ4 246 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 GON7Q9BXV9 100 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RUBCNLQ9H714 662 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 ZFP14Q9HCL3 533 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 RBM22Q9NW64 420 aaKnown RBP eCLIP9.55□□□□□ -0.88
TCF4-208ENST00000543082 HOXC10Q9NYD6 342 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 TRAPPC4Q9Y296 219 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 ERVH48-1M5A8F1 160 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 SSX4O60224 188 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 DFNA5O60443 496 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 SEMA3DO95025 777 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 SLC2A3P11169 496 aa9.55□□□□□ -0.88
TCF4-208ENST00000543082 CYP2A7P20853 494 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms