RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PHKG1Q16816 387 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 PPP1R3AQ16821 1122 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 PFKFB4Q16877 469 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 LIPMQ5VYY2 423 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 ZCCHC23Q6ZST2 131 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 SLC22A9Q8IVM8 553 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 FBXO39Q8N4B4 442 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 SPDYE1Q8NFV5 336 aaPredicted RBP20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 SLC12A9Q9BXP2 914 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 TRIM54Q9BYV2 358 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 WWP1Q9H0M0 922 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 CCDC134Q9H6E4 229 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 PARVBQ9HBI1 364 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 NCKIPSDQ9NZQ3 722 aa20.89■□□□□ 0.94
R3HCC1-208ENST00000522012 PABPN1LA6NDY0 278 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 TCP11X1B4DZS4 312 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 IPO13O94829 963 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 GUCA1CO95843 209 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 SLC35G4P0C7Q5 338 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 SP9P0CG40 484 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 FGF3P11487 239 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CYP2A7P20853 494 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 IDSP22304 550 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 MAP4P27816 1152 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 MAPK9P45984 424 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CSNK1EP49674 416 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CLCNKAP51800 687 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PRKAA2P54646 552 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CTBSQ01459 385 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ASPHQ12797 758 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 LRP8Q14114 963 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ANGPT1Q15389 498 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PLK5Q496M5 336 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 RAB44Q7Z6P3 723 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PDZD3Q86UT5 571 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PARGQ86W56 976 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PTGR2Q8N8N7 351 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 MCOLN3Q8TDD5 553 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ZSCAN32Q9NX65 697 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 NUDT4Q9NZJ9 180 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PDE10AQ9Y233 779 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ATXN2Q99700 1313 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 IFRD1O00458 451 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 FFAR2O15552 330 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PSIP1O75475 530 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ENO2P09104 434 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 HIST1H2AGP0C0S8 130 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 HIST1H2ADP20671 130 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 AK4P27144 223 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ACADLP28330 430 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 RPIAP49247 311 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 AFF3P51826 1226 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 C21orf59P57076 290 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ZNF528Q3MIS6 628 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ATG16L1Q676U5 607 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 SPATS2Q86XZ4 545 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CCNYL1Q8N7R7 359 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CCL4L1Q8NHW4 92 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 NELL1Q92832 810 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 SKA1Q96BD8 255 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 HIST1H2AHQ96KK5 128 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 HIST1H2AJQ99878 128 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 EGFL8Q99944 293 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 H2AFJQ9BTM1 129 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 TCEAL2Q9H3H9 227 aaPredicted RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 CAAP1Q9H8G2 361 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 RDH14Q9HBH5 336 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ACSS2Q9NR19 701 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 TRNAU1APQ9NX07 287 aaKnown RBP20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 DNAJC28Q9NX36 388 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 KLF15Q9UIH9 416 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 TMCO1Q9UM00 188 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 ST14Q9Y5Y6 855 aa20.88■□□□□ 0.93
R3HCC1-208ENST00000522012 PDZK1P1A8MUH7 402 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 CATP04040 527 aaKnown RBP20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 SERPINE1P05121 402 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 VIMP08670 466 aaKnown RBP20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 CNR2P34972 360 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 BLKP51451 505 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 NAGLUP54802 743 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 DNAJB13P59910 316 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 NFKB2Q00653 900 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 STX3Q13277 289 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 PHACTR4Q8IZ21 702 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 RAB3IL1Q8TBN0 382 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 GATA5Q9BWX5 397 aaPredicted RBP20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 ZDHHC5Q9C0B5 715 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 PRDM8Q9NQV8 689 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 ARL15Q9NXU5 204 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 ASF1AQ9Y294 204 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 WDR37Q9Y2I8 494 aa20.87■□□□□ 0.93
R3HCC1-208ENST00000522012 PRR19A6NJB7 356 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 ARHGEF33A8MVX0 844 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 VILLO15195 856 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 H2AFYO75367 372 aaKnown RBP20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 CTSEP14091 401 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 GNSP15586 552 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 ACTR1BP42025 376 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 BDKRB1P46663 353 aa20.86■□□□□ 0.93
R3HCC1-208ENST00000522012 ALDH18A1P54886 795 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms