RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PTGESO14684 152 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CETN3O15182 167 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 MAPK13O15264 365 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 LDB2O43679 373 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SH3BP5O60239 455 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 GNA14O95837 355 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 TK1P04183 234 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC192P0DO97 292 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CXCL8P10145 99 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 DAOP14920 347 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 MYOGP15173 224 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CYP3A5P20815 502 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 PSMC2P35998 433 aaKnown RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 TNFSF9P41273 254 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 DPP6P42658 865 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CASP4P49662 377 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 STX17P56962 302 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ARHGAP8P85298 464 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ENPEPQ07075 957 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 GRIK3Q13003 919 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 PDCLQ13371 301 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 BTG3Q14201 252 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 PSMD6Q15008 389 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ZBTB6Q15916 424 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SNRNP35Q16560 246 aaKnown RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 STX1AQ16623 288 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 KIF19Q2TAC6 998 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 DPCR1Q3MIW9 517 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ZSCAN23Q3MJ62 389 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 LRIT3Q3SXY7 679 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CTXN3Q4LDR2 81 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ALFQ53S48 1182 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SPATA1Q5VX52 437 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 FAM109BQ6ICB4 259 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 KLHL10Q6JEL2 608 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CYP26C1Q6V0L0 522 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 NEK10Q6ZWH5 1172 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 H1FNTQ75WM6 255 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SYT13Q7L8C5 426 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 TMCO2Q7Z6W1 182 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 MOGAT3Q86VF5 341 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CBWD2Q8IUF1 395 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ZC3H3Q8IXZ2 948 aaKnown RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 RBFAQ8N0V3 343 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 LRRC43Q8N309 656 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CSGALNACT2Q8N6G5 542 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 PAF1Q8N7H5 531 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 LMO3Q8TAP4 145 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SPPL3Q8TCT6 385 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 URGCPQ8TCY9 931 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 LMLNQ96KR4 655 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM175Q9BSA9 504 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 FUCA2Q9BTY2 467 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 MRPL9Q9BYD2 267 aaKnown RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ASB7Q9H672 318 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 SLC38A7Q9NVC3 462 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 TBC1D13Q9NVG8 400 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 RBAKQ9NYW8 714 aaPredicted RBP3.28□□□□□ -1.88
VPS13B-209ENST00000521559 UPB1Q9UBR1 384 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 ICAM5Q9UMF0 924 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 RCE1Q9Y256 329 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 DERAQ9Y315 318 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 C2CD2Q9Y426 696 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 CEP350Q5VT06 3117 aa3.28□□□□□ -1.88
VPS13B-209ENST00000521559 KIAA0100Q14667 2235 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 IGHV4-28A0A0C4DH34 117 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SYCE3A1L190 88 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 LINC01553A4QN01 128 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM49BA6NDI0 452 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 EIF3FO00303 357 aaPredicted RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 FAM155BO75949 473 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 AKAP3O75969 853 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 DDHD2O94830 711 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CBX6O95503 412 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CAVIN2O95810 425 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 IL1AP01583 271 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 RB1P06400 928 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CA3P07451 260 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 GALTP07902 379 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 LINC00271P0C7V0 271 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 EPB41P11171 864 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 LYL1P12980 280 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 KRT13P13646 458 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ACP5P13686 325 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 ARSAP15289 507 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 NR2F2P24468 414 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 AVPR2P30518 371 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 GTF2H1P32780 548 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 RPL9P32969 192 aaKnown RBP3.27□□□□□ -1.89
VPS13B-209ENST00000521559 GJC1P36383 396 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 VAMP7P51809 220 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 MVDP53602 400 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 AP3M2P53677 418 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 PRKAA2P54646 552 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 RBP5P82980 135 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 SPAG1Q07617 926 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 CYP24A1Q07973 514 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 KIF5AQ12840 1032 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 HNF4GQ14541 408 aa3.27□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM132DQ14C87 1099 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms