RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PRAMEP78395 509 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CRADDP78560 199 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 B4GALNT1Q00973 533 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 INSM1Q01101 510 aaPredicted RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 DMPKQ09013 629 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 KIR2DS5Q14953 304 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 INSCQ1MX18 579 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 BCL7AQ4VC05 210 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 PERM1Q5SV97 790 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 GRTP1Q5TC63 336 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CASC4Q6P4E1 433 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 AFTPHQ6ULP2 937 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 ABRAXAS1Q6UWZ7 409 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 PACS1Q6VY07 963 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 DET1Q7L5Y6 550 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CPLX4Q7Z7G2 160 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SFTPA2Q8IWL1 248 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 PIANPQ8IYJ0 282 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CACNA2D3Q8IZS8 1091 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 C4orf33Q8N1A6 199 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 BEND7Q8N7W2 519 aaPredicted RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 PPM1NQ8N819 430 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 UNC13CQ8NB66 2214 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 AVL9Q8NBF6 648 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCL28-204ENST00000514421 OR2L2Q8NH16 312 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 RAB3IL1Q8TBN0 382 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SH3KBP1Q96B97 665 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 LINC00615Q96LM1 132 aaPredicted RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 FCRL3Q96P31 734 aaPredicted RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 CPNE1Q99829 537 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 CCDC3Q9BQI4 270 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 PLCD4Q9BRC7 762 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 TRIM56Q9BRZ2 755 aaKnown RBP8.16□□□□□ -1.1
CCL28-204ENST00000514421 PRDM8Q9NQV8 689 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 TREX1Q9NSU2 369 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 NSMCE4AQ9NXX6 385 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 SAMD15Q9P1V8 674 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 DNAJC16Q9Y2G8 782 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 MSRB2Q9Y3D2 182 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 NEUROG3Q9Y4Z2 214 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 RNF215Q9Y6U7 377 aa8.16□□□□□ -1.1
CCL28-204ENST00000514421 RP1P56715 2156 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 A6NCN8 305 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 OR51F1A6NGY5 319 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PRR19A6NJB7 356 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PDZK1P1A8MUH7 402 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 F8W8V4 182 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 QSOX1O00391 747 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PPM1DO15297 605 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CD3EAPO15446 510 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 B4GAT1O43505 415 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 SGTAO43765 313 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 SPAG7O75391 227 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PIAS1O75925 651 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 EML2O95834 649 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 ALDOAP04075 364 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 GSTM1P09488 218 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PRSS56P0CW18 603 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PYGBP11216 843 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 SPINK2P20155 84 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 NMBRP28336 390 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 GP5P40197 560 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 FASLGP48023 281 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 ARCN1P48444 511 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 CSE1LP55060 971 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 MAZP56270 477 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 CORO7P57737 925 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CCL7P80098 99 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 GSTM4Q03013 218 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 ILF2Q12905 390 aaKnown RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 TARDBPQ13148 414 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCL28-204ENST00000514421 PLA2G4EQ3MJ16 856 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 LACTB2Q53H82 288 aaPredicted RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 TEDDM1Q5T9Z0 273 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 HES3Q5TGS1 186 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 AGAP9Q5VTM2 703 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CDCP2Q5VXM1 449 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 METRNLQ641Q3 311 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CGB2Q6NT52 195 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CES3Q6UWW8 571 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 GALNT7Q86SF2 657 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 SDCCAG8Q86SQ7 713 aaPredicted RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 SLC9B2Q86UD5 537 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 LCA5Q86VQ0 697 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CTAGE3PQ8IX95 158 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CFAP206Q8IYR0 622 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 ANKRD42Q8N9B4 389 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 Q8N9G6 341 aaPredicted RBP8.15□□□□□ -1.1
CCL28-204ENST00000514421 CCDC197Q8NCU1 140 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 TCP10LQ8TDR4 215 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 SLC37A2Q8TED4 501 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 DYDC1Q8WWB3 177 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 PATE1Q8WXA2 126 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CCDC74AQ96AQ1 378 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 MFSD3Q96ES6 412 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 CCM2Q9BSQ5 444 aa8.15□□□□□ -1.1
CCL28-204ENST00000514421 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms