RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 EDEM2Q9BV94 578 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 SGPP1Q9BX95 441 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 NDUFS3O75489 264 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLC19A1P41440 591 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 ARRB1P49407 418 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 TECRLQ5HYJ1 363 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRSS42Q7Z5A4 293 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 KIAA1191Q96A73 305 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 CABS1Q96KC9 395 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 RASGRF2O14827 1237 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 C8GP07360 202 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 SERPINB8P50452 374 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 MAP9Q49MG5 647 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 HP1BP3Q5SSJ5 553 aaPredicted RBP8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 ISCA2Q86U28 154 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 KRT222Q8N1A0 295 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 RTKNQ9BST9 563 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 SMOC1Q9H4F8 434 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 SNX15Q9NRS6 342 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 ICKQ9UPZ9 632 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
CDC42SE2-208ENST00000505065 IQCF5A8MTL0 148 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ATP8B1O43520 1251 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SIGLEC6O43699 453 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 KLHL2O95198 593 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 FMO4P31512 558 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ETV4P43268 484 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 GTF2H3Q13889 308 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SPRED1Q7Z699 444 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PIM3Q86V86 326 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ARL14Q8N4G2 192 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 BANPQ8N9N5 519 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SIDT2Q8NBJ9 832 aaKnown RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR56A3Q8NH54 315 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZDHHC1Q8WTX9 485 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SNX19Q92543 992 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 APOLD1Q96LR9 279 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 GPR21Q99679 349 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 TAS2R13Q9NYV9 303 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 POLG2Q9UHN1 485 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SERTM1A2A2V5 107 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PPM1DO15297 605 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRPF4O43172 522 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 AK4P27144 223 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 NDUFS1P28331 727 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 CASC4Q6P4E1 433 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ADGRF3Q8IZF5 1079 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 NKAPQ8N5F7 415 aaKnown RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2L8Q8NGY9 312 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PTERQ96BW5 349 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 FBXL8Q96CD0 374 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 TSPAN17Q96FV3 270 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ZIM3Q96PE6 472 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 WWP1Q9H0M0 922 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ANKMY1Q9P2S6 941 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ADAMTS6Q9UKP5 1117 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMCO1Q9UM00 188 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SSUH2Q9Y2M2 353 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 CDH16O75309 829 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ONECUT2O95948 504 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 F7P08709 466 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 CRHR1P34998 444 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 ATP6V0D1P61421 351 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PAQR3Q6TCH7 311 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 RAB44Q7Z6P3 723 aaPredicted RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 SLITRK4Q8IW52 837 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 DCUN1D1Q96GG9 259 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 CDC6Q99741 560 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 TMBIM4Q9HC24 238 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PRDM8Q9NQV8 689 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 KLC4Q9NSK0 619 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 DNAJC28Q9NX36 388 aa8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 PTBP2Q9UKA9 531 aaKnown RBP8.07□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR2AG2A6NM03 316 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACSL3O95573 720 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CEACAM1P13688 526 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 VCLP18206 1134 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CD1CP29017 333 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ACAP2Q15057 778 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 NR0B2Q15466 257 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SMAD1Q15797 465 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 INAVAQ3KP66 663 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 TAS2R42Q7RTR8 314 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SFTPA2Q8IWL1 248 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 LINC01555Q8NAE3 123 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 OR4K1Q8NGD4 311 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 WDR48Q8TAF3 677 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 EEF1AKMT1Q8WVE0 214 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 KLHL6Q8WZ60 621 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 HEATR5BQ9P2D3 2071 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 MDC1Q14676 2089 aaKnown RBP8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CCDC78A2IDD5 438 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 ARHGEF33A8MVX0 844 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 VPS26AO75436 327 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SASH3O75995 380 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 CKMT2P17540 419 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 EPORP19235 508 aa8.06□□□□□ -1.12
CDC42SE2-208ENST00000505065 SDHBP21912 280 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms