RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NRBP1Q9UHY1 535 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 CTNNA3Q9UI47 895 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 SUFUQ9UMX1 484 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 PCDHGB5Q9Y5G0 923 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 UBIAD1Q9Y5Z9 338 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 MTCH2Q9Y6C9 303 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 MROH7Q68CQ1 1323 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 MUC6Q6W4X9 2439 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 ANKRD36A6QL64 1941 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 THADAQ6YHU6 1953 aa3.11□□□□□ -1.91
PTCD3-218ENST00000493430 VCANP13611 3396 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ABHD14A-ACY1A0A1B0GW23 586 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ARHGAP10A1A4S6 786 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ASPDHA6ND91 283 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 LILRA5A6NI73 299 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SOCS6O14544 535 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 FIBPO43427 364 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 TBX6O95947 436 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PRSS1P07477 247 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PCNAP12004 261 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SCG2P13521 617 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 FDPSP14324 419 aaKnown RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 CD58P19256 250 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 METAP2P50579 478 aaKnown RBP eCLIP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PMP22Q01453 160 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ITGADQ13349 1161 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 RUNX2Q13950 521 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 NEDD9Q14511 834 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 CTXN3Q4LDR2 81 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 CCDC38Q502W7 563 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PAPPA-AS1Q5QFB9 102 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 WDR73Q6P4I2 378 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 BLOC1S2Q6QNY1 142 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 RUFY3Q7L099 469 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SERINC5Q86VE9 423 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 TMEM173Q86WV6 379 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 MYLK4Q86YV6 388 aaPredicted RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SPEM1Q8N4L4 309 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 GJC3Q8NFK1 279 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 VN1R2Q8NFZ6 395 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SPATA22Q8NHS9 363 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PPTC7Q8NI37 304 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 CRYGNQ8WXF5 182 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SNAPC3Q92966 411 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ERGIC1Q969X5 290 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 B3GALT6Q96L58 329 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 KXD1Q9BQD3 176 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 MXRA8Q9BRK3 442 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 EPHX3Q9H6B9 360 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 PSTPIP2Q9H939 334 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 RIC8AQ9NPQ8 531 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 SEC63Q9UGP8 760 aaKnown RBP3.1□□□□□ -1.91
PTCD3-218ENST00000493430 TUBE1Q9UJT0 475 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 DERAQ9Y315 318 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 NFE2L3Q9Y4A8 694 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 ZDBF2Q9HCK1 2354 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 NID2Q14112 1375 aa3.1□□□□□ -1.91
PTCD3-218ENST00000493430 TDRD6O60522 2096 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PP2D1A8MPX8 630 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 RSPH10B2B2RC85 870 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 STX16-NPEPL1H3BU86 382 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 IPO5O00410 1097 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 STX16O14662 325 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CAPN9O14815 690 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PER2O15055 1255 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 MSH4O15457 936 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PLRG1O43660 514 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 STBD1O95210 358 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 GJB5O95377 273 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CXCL10P02778 98 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 RSPH10BP0C881 870 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PCP11498 1178 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CDH1P12830 882 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PTPN2P17706 415 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CHATP28329 748 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 HOXC8P31273 242 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 ICAM3P32942 547 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CTNNB1P35222 781 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PI4KAP42356 2102 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 FMO5P49326 533 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 BLKP51451 505 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 NR1H2P55055 460 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 YWHAZP63104 245 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 MRPS6P82932 125 aaKnown RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 PRKCEQ02156 737 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 RELQ04864 619 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 SLC20A2Q08357 652 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CAMK1Q14012 370 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 TCEAL5Q5H9L2 206 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 FBXO47Q5MNV8 452 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 METTL7BQ6UX53 244 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 TBC1D26Q86UD7 250 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 NFE4Q86UQ8 179 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 MYPOPQ86VE0 399 aaPredicted RBP3.09□□□□□ -1.91
PTCD3-218ENST00000493430 FAM228AQ86W67 206 aa3.09□□□□□ -1.91
PTCD3-218ENST00000493430 CCDC83Q8IWF9 413 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms