RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 IGLV5-45A0A087WSX0 123 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 LRRC72A6NJI9 287 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 H0YIN7 160 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 EIF3DO15371 548 aaKnown RBP eCLIP4.15□□□□□ -1.75
ITGB1-214ENST00000488427 DDNO94850 711 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-214ENST00000488427 GH2P01242 217 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 RXRGP48443 463 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 SIRPB2Q5JXA9 342 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 FAM171BQ6P995 826 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 C19orf48Q6RUI8 117 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 CHST9Q7L1S5 443 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 TMPRSS12Q86WS5 348 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 DEFB123Q8N688 67 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 C1orf52Q8N6N3 182 aaKnown RBP4.15□□□□□ -1.75
ITGB1-214ENST00000488427 SLC38A9Q8NBW4 561 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 ACVR1CQ8NER5 493 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 GSDMBQ8TAX9 411 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 ZKSCAN4Q969J2 545 aaPredicted RBP4.15□□□□□ -1.75
ITGB1-214ENST00000488427 RHBDF1Q96CC6 855 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 LINGO1Q96FE5 620 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 DUX3Q96PT4 197 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 NODALQ96S42 347 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 ITPAQ9BY32 194 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 PLK3Q9H4B4 646 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 TAAR2Q9P1P5 351 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 EXO1Q9UQ84 846 aaKnown RBP4.15□□□□□ -1.75
ITGB1-214ENST00000488427 SPTBN4Q9H254 2564 aa4.15□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD30AQ9BXX3 1397 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 TAF1P21675 1872 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 FRMD3A2A2Y4 597 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD18BA2A2Z9 1011 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 IGHV4-39P01824 125 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 CLTBP09497 229 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 RARGP13631 454 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 MCCP23508 829 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 CASP2P42575 452 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 NR2C2P49116 596 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 DRG2P55039 364 aaKnown RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 BRWD1-AS2P59051 145 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ISL1P61371 349 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 COG7P83436 770 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 MEP1AQ16819 746 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 LRIF1Q5T3J3 769 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ZNF852Q6ZMS4 543 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 SLC26A9Q7LBE3 791 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 DSG4Q86SJ6 1040 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 LONP2Q86WA8 852 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 FOXP4Q8IVH2 680 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 TTC39CQ8N584 583 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ANKRD52Q8NB46 1076 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 PPFIBP2Q8ND30 876 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 GRAPLQ8TC17 118 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 NR4A3Q92570 626 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 ELMOD3Q96FG2 381 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 EGLN2Q96KS0 407 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 OR2A14Q96R47 310 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 TRMT61BQ9BVS5 477 aaKnown RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 FTOQ9C0B1 505 aaKnown RBP eCLIP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 CSTL1Q9H114 145 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 RAD21L1Q9H4I0 556 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 SEPT11Q9NVA2 429 aaKnown RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 MTMR10Q9NXD2 777 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 TRMT1Q9NXH9 659 aaKnown RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 RCC2Q9P258 522 aaKnown RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 FAF1Q9UNN5 650 aaPredicted RBP4.14□□□□□ -1.75
ITGB1-214ENST00000488427 YIPF1Q9Y548 306 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 LTN1O94822 1766 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 CCDC7Q96M83 1385 aa4.14□□□□□ -1.75
ITGB1-214ENST00000488427 PTGES3LE9PB15 166 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 XPNPEP2O43895 674 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 BMP10O95393 424 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 UMODP07911 640 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 GM2AP17900 193 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 PON1P27169 355 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 ACADLP28330 430 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 KCNC3Q14003 757 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 RBBP5Q15291 538 aaKnown RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 MAPRE1Q15691 268 aaKnown RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 ASTE1Q2TB18 679 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 PLEKHS1Q5SXH7 462 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 HYIQ5T013 277 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 OTUD3Q5T2D3 398 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 NSUN5P2Q63ZY6 315 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 C1orf122Q6ZSJ8 110 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 TBC1D1Q86TI0 1168 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 WDTC1Q8N5D0 677 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 OR52I2Q8NH67 350 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 LRRC8CQ8TDW0 803 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 FBXO17Q96EF6 278 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 SAT2Q96F10 170 aaPredicted RBP4.13□□□□□ -1.75
ITGB1-214ENST00000488427 LRRC4Q9HBW1 653 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 TBC1D22BQ9NU19 505 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 SETD4Q9NVD3 440 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 AMACRQ9UHK6 382 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 PADI3Q9ULW8 664 aa4.13□□□□□ -1.75
ITGB1-214ENST00000488427 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms