RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GPR78Q96P69 363 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DHRS4Q9BTZ2 278 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 C9orf16Q9BUW7 83 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM121BQ9BXQ6 578 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RHBGQ9H310 441 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PNPLA8Q9NP80 782 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 C14orf119Q9NWQ9 140 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 COMMD8Q9NX08 183 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DUS2Q9NX74 493 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SMPD3Q9NY59 655 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ADAM28Q9UKQ2 775 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RAB23Q9ULC3 237 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PADI4Q9UM07 663 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SYNPO2Q9UMS6 1093 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SPTBN4Q9H254 2564 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 A0A0J9YVX5 310 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SMIM31A0A1B0GVY4 71 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM114B3SHH9 223 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 H3BNX3 289 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RFXANKO14593 260 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MUSKO15146 869 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ATE1O95260 518 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 VIPP01282 170 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MNX1P50219 401 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MLLT10P55197 1068 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RPS26P62854 115 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CLDN10P78369 228 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 IRF8Q02556 426 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SEMA3AQ14563 771 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RAB39AQ14964 217 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 HYAL4Q2M3T9 481 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SOWAHCQ53LP3 525 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 DCLRE1AQ6PJP8 1040 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 OLIG3Q7RTU3 272 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ITIH5Q86UX2 942 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SLC22A9Q8IVM8 553 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 LSMEM2Q8N112 164 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 STX19Q8N4C7 294 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ADCY4Q8NFM4 1077 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 OR4F6Q8NGB9 312 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 OR4K1Q8NGD4 311 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RPL3LQ92901 407 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MYEOVQ96EZ4 313 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SLC47A1Q96FL8 570 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CITED4Q96RK1 184 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 GFM1Q96RP9 751 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 GAL3ST1Q99999 423 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RAD21L1Q9H4I0 556 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SYTL2Q9HCH5 934 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 WDR6Q9NNW5 1121 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 GIMAP4Q9NUV9 329 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 IGSF9Q9P2J2 1179 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ACSL6Q9UKU0 697 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CDH9Q9ULB4 789 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 PLAGL1Q9UM63 463 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SLC45A1Q9Y2W3 748 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 PCDHGA7Q9Y5G6 932 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 LYVE1Q9Y5Y7 322 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CKAP5Q14008 2032 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 IGKV6D-21A0A0A0MT36 114 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 HIDE1A8MVS5 230 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SLCO1B7G3V0H7 640 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 PLK4O00444 970 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 LSM1O15116 133 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 TRIM24O15164 1050 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 INSIG1O15503 277 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MAFKO60675 156 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 INMTO95050 263 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 GJA8P48165 433 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 NCS1P62166 190 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 XIAPP98170 497 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 UNC50Q53HI1 259 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 PIGGQ5H8A4 983 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 TRAF7Q6Q0C0 670 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SUSD1Q6UWL2 747 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 NANOGNBQ7Z5D8 188 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CILP2Q8IUL8 1156 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 RELL1Q8IUW5 271 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 GPR65Q8IYL9 337 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 NLGN4XQ8N0W4 816 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 FIBCD1Q8N539 461 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 MCOLN3Q8TDD5 553 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 STYXQ8WUJ0 223 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 BIRC7Q96CA5 298 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ISOC1Q96CN7 298 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 TMEM169Q96HH4 297 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF419Q96HQ0 510 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 NECTIN4Q96NY8 510 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CORO1BQ9BR76 489 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 C11orf16Q9NQ32 467 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 NSMCE4AQ9NXX6 385 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 EHD3Q9NZN3 535 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 IL20RAQ9UHF4 553 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 PRPF19Q9UMS4 504 aaKnown RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 SLC9A8Q9Y2E8 581 aa4.9□□□□□ -1.62
CCDC39-204ENST00000476379 CAB39Q9Y376 341 aaPredicted RBP4.9□□□□□ -1.62
CCDC39-204ENST00000476379 FAM32AQ9Y421 112 aaKnown RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms