RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 EPHB1P54762 984 aa9.1□□□□□ -0.95
APP-213ENST00000464867 BPIFB4P59827 614 aa9.1□□□□□ -0.95
APP-213ENST00000464867 MYBPHQ13203 477 aa9.1□□□□□ -0.95
APP-213ENST00000464867 CUL4AQ13619 759 aa9.1□□□□□ -0.95
APP-213ENST00000464867 CCDC14Q49A88 953 aa9.1□□□□□ -0.95
APP-213ENST00000464867 AGAP9Q5VTM2 703 aa9.1□□□□□ -0.95
APP-213ENST00000464867 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
APP-213ENST00000464867 WASH2PQ6VEQ5 465 aa9.1□□□□□ -0.95
APP-213ENST00000464867 Q6ZS46 218 aa9.1□□□□□ -0.95
APP-213ENST00000464867 RAVER1Q8IY67 606 aaKnown RBP9.1□□□□□ -0.95
APP-213ENST00000464867 GPR135Q8IZ08 494 aa9.1□□□□□ -0.95
APP-213ENST00000464867 PYROXD2Q8N2H3 581 aa9.1□□□□□ -0.95
APP-213ENST00000464867 TAB3Q8N5C8 712 aaPredicted RBP9.1□□□□□ -0.95
APP-213ENST00000464867 OR1L3Q8NH93 324 aa9.1□□□□□ -0.95
APP-213ENST00000464867 SUN3Q8TAQ9 357 aa9.1□□□□□ -0.95
APP-213ENST00000464867 FAM172AQ8WUF8 416 aa9.1□□□□□ -0.95
APP-213ENST00000464867 RXFP2Q8WXD0 754 aa9.1□□□□□ -0.95
APP-213ENST00000464867 N4BP2L2Q92802 583 aaPredicted RBP9.1□□□□□ -0.95
APP-213ENST00000464867 THOC3Q96J01 351 aaKnown RBP9.1□□□□□ -0.95
APP-213ENST00000464867 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.1□□□□□ -0.95
APP-213ENST00000464867 OR2AG1Q9H205 316 aa9.1□□□□□ -0.95
APP-213ENST00000464867 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
APP-213ENST00000464867 METTL5Q9NRN9 209 aaKnown RBP9.1□□□□□ -0.95
APP-213ENST00000464867 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
APP-213ENST00000464867 TRIM10Q9UDY6 481 aa9.1□□□□□ -0.95
APP-213ENST00000464867 KCNN3Q9UGI6 736 aa9.1□□□□□ -0.95
APP-213ENST00000464867 ST6GALNAC2Q9UJ37 374 aa9.1□□□□□ -0.95
APP-213ENST00000464867 CNOT6Q9ULM6 557 aaKnown RBP9.1□□□□□ -0.95
APP-213ENST00000464867 DFFAO00273 331 aa9.09□□□□□ -0.95
APP-213ENST00000464867 ZNF749O43361 778 aa9.09□□□□□ -0.95
APP-213ENST00000464867 SLC25A14O95258 325 aaPredicted RBP9.09□□□□□ -0.95
APP-213ENST00000464867 PGLSO95336 258 aa9.09□□□□□ -0.95
APP-213ENST00000464867 UQCRHP07919 91 aa9.09□□□□□ -0.95
APP-213ENST00000464867 CYP11B1P15538 503 aa9.09□□□□□ -0.95
APP-213ENST00000464867 CDH3P22223 829 aa9.09□□□□□ -0.95
APP-213ENST00000464867 UGT1A4P22310 534 aa9.09□□□□□ -0.95
APP-213ENST00000464867 MST1P26927 711 aa9.09□□□□□ -0.95
APP-213ENST00000464867 PCSK6P29122 969 aa9.09□□□□□ -0.95
APP-213ENST00000464867 CDC25BP30305 580 aa9.09□□□□□ -0.95
APP-213ENST00000464867 PMS1P54277 932 aaKnown RBP9.09□□□□□ -0.95
APP-213ENST00000464867 DRG2P55039 364 aaKnown RBP9.09□□□□□ -0.95
APP-213ENST00000464867 TPI1P60174 286 aa9.09□□□□□ -0.95
APP-213ENST00000464867 YBX1P67809 324 aaKnown RBP9.09□□□□□ -0.95
APP-213ENST00000464867 DCDP81605 110 aaKnown RBP9.09□□□□□ -0.95
APP-213ENST00000464867 IL10RBQ08334 325 aa9.09□□□□□ -0.95
APP-213ENST00000464867 DMPKQ09013 629 aa9.09□□□□□ -0.95
APP-213ENST00000464867 PRKAA1Q13131 559 aa9.09□□□□□ -0.95
APP-213ENST00000464867 STIM1Q13586 685 aa9.09□□□□□ -0.95
APP-213ENST00000464867 RAB6CQ53S08 254 aa9.09□□□□□ -0.95
APP-213ENST00000464867 C2CD6Q53TS8 623 aa9.09□□□□□ -0.95
APP-213ENST00000464867 ATL3Q6DD88 541 aa9.09□□□□□ -0.95
APP-213ENST00000464867 SCYL2Q6P3W7 929 aa9.09□□□□□ -0.95
APP-213ENST00000464867 LRRTM4Q86VH4 590 aa9.09□□□□□ -0.95
APP-213ENST00000464867 SDCCAG3Q96C92 435 aa9.09□□□□□ -0.95
APP-213ENST00000464867 NUDCD1Q96RS6 583 aa9.09□□□□□ -0.95
APP-213ENST00000464867 TIMM29Q9BSF4 260 aa9.09□□□□□ -0.95
APP-213ENST00000464867 AP1M1Q9BXS5 423 aa9.09□□□□□ -0.95
APP-213ENST00000464867 SLC39A8Q9C0K1 460 aa9.09□□□□□ -0.95
APP-213ENST00000464867 RAB6CQ9H0N0 254 aa9.09□□□□□ -0.95
APP-213ENST00000464867 FAM83DQ9H4H8 585 aa9.09□□□□□ -0.95
APP-213ENST00000464867 TRIM39Q9HCM9 518 aa9.09□□□□□ -0.95
APP-213ENST00000464867 FAM207AQ9NSI2 230 aaPredicted RBP9.09□□□□□ -0.95
APP-213ENST00000464867 SEPT11Q9NVA2 429 aaKnown RBP9.09□□□□□ -0.95
APP-213ENST00000464867 CDC23Q9UJX2 597 aa9.09□□□□□ -0.95
APP-213ENST00000464867 PPIL1Q9Y3C6 166 aa9.09□□□□□ -0.95
APP-213ENST00000464867 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.09□□□□□ -0.95
APP-213ENST00000464867 GTF3C1Q12789 2109 aa9.08□□□□□ -0.96
APP-213ENST00000464867 FAM170AA1A519 330 aa9.08□□□□□ -0.96
APP-213ENST00000464867 PSMA7O14818 248 aa9.08□□□□□ -0.96
APP-213ENST00000464867 DDX3YO15523 660 aaKnown RBP9.08□□□□□ -0.96
APP-213ENST00000464867 DAPK3O43293 454 aa9.08□□□□□ -0.96
APP-213ENST00000464867 PRAMEF2O60811 474 aa9.08□□□□□ -0.96
APP-213ENST00000464867 SMNDC1O75940 238 aaKnown RBP eCLIP9.08□□□□□ -0.96
APP-213ENST00000464867 PYGMP11217 842 aa9.08□□□□□ -0.96
APP-213ENST00000464867 BRAFP15056 766 aa9.08□□□□□ -0.96
APP-213ENST00000464867 MMP11P24347 488 aa9.08□□□□□ -0.96
APP-213ENST00000464867 CDH5P33151 784 aaPredicted RBP9.08□□□□□ -0.96
APP-213ENST00000464867 HTR7P34969 479 aa9.08□□□□□ -0.96
APP-213ENST00000464867 RFC1P35251 1148 aaPredicted RBP9.08□□□□□ -0.96
APP-213ENST00000464867 PTPN9P43378 593 aa9.08□□□□□ -0.96
APP-213ENST00000464867 TNFSF10P50591 281 aa9.08□□□□□ -0.96
APP-213ENST00000464867 STC1P52823 247 aa9.08□□□□□ -0.96
APP-213ENST00000464867 PPP2R2BQ00005 443 aa9.08□□□□□ -0.96
APP-213ENST00000464867 TRAF2Q12933 501 aa9.08□□□□□ -0.96
APP-213ENST00000464867 PTPRRQ15256 657 aa9.08□□□□□ -0.96
APP-213ENST00000464867 RALGPS1Q5JS13 557 aa9.08□□□□□ -0.96
APP-213ENST00000464867 ZNF658Q5TYW1 1059 aaPredicted RBP9.08□□□□□ -0.96
APP-213ENST00000464867 GJB7Q6PEY0 223 aa9.08□□□□□ -0.96
APP-213ENST00000464867 TRIM65Q6PJ69 517 aa9.08□□□□□ -0.96
APP-213ENST00000464867 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.08□□□□□ -0.96
APP-213ENST00000464867 CAMKMTQ7Z624 323 aa9.08□□□□□ -0.96
APP-213ENST00000464867 SPPL2CQ8IUH8 684 aa9.08□□□□□ -0.96
APP-213ENST00000464867 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
APP-213ENST00000464867 GPT2Q8TD30 523 aa9.08□□□□□ -0.96
APP-213ENST00000464867 RMND5BQ96G75 393 aaPredicted RBP9.08□□□□□ -0.96
APP-213ENST00000464867 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
APP-213ENST00000464867 ZNF599Q96NL3 588 aa9.08□□□□□ -0.96
APP-213ENST00000464867 POLDIP3Q9BY77 421 aaKnown RBP9.08□□□□□ -0.96
APP-213ENST00000464867 NOD2Q9HC29 1040 aa9.08□□□□□ -0.96
APP-213ENST00000464867 C1GALT1Q9NS00 363 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms