RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 OR2T12Q8NG77 320 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 CLHC1Q8NHS4 586 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 GAB3Q8WWW8 586 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 C12orf43Q96C57 262 aaKnown RBP16.62■□□□□ 0.25
ACTB-207ENST00000462494 IGSF21Q96ID5 467 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 TBCDQ9BTW9 1192 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 DPY30Q9C005 99 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 POLR1BQ9H9Y6 1135 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 HMX1Q9NP08 348 aaPredicted RBP16.62■□□□□ 0.25
ACTB-207ENST00000462494 ZNHIT2Q9UHR6 403 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 ZNF639Q9UID6 485 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 PLXNA4Q9HCM2 1894 aa16.62■□□□□ 0.25
ACTB-207ENST00000462494 ABLIM3O94929 683 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 MSH3P20585 1137 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 AKT1P31749 480 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ADARB1P78563 741 aaKnown RBP16.61■□□□□ 0.25
ACTB-207ENST00000462494 CTBSQ01459 385 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 SPANXN4Q5MJ08 99 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 FAM86B1Q8N7N1 296 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 DCAF4L2Q8NA75 395 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 OR8J3Q8NGG0 315 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 RHBDF1Q96CC6 855 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ALG14Q96F25 216 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 MUS81Q96NY9 551 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 CXorf21Q9HAI6 301 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 LIMD1Q9UGP4 676 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 STOML2Q9UJZ1 356 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 NEUROG3Q9Y4Z2 214 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 PCDHGA11Q9Y5H2 935 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 LOC730098B7Z3J9 87 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 BNIP3LO60238 219 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 PQBP1O60828 265 aaKnown RBP16.61■□□□□ 0.25
ACTB-207ENST00000462494 TCF3P15923 654 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 EEF1B2P24534 225 aaKnown RBP16.61■□□□□ 0.25
ACTB-207ENST00000462494 ARSFP54793 590 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 DCTN2Q13561 401 aaKnown RBP16.61■□□□□ 0.25
ACTB-207ENST00000462494 KIAA0040Q15053 153 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 NEDD8Q15843 81 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 CACHD1Q5VU97 1274 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 GPR107Q5VW38 600 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 SULT1C3Q6IMI6 304 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 RETSATQ6NUM9 610 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ENPP6Q6UWR7 440 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 KCTD8Q6ZWB6 473 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 TMEM150AQ86TG1 271 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ITIH5Q86UX2 942 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ADGRG2Q8IZP9 1017 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 ADAMTS16Q8TE57 1224 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 GTF2H4Q92759 462 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 C2orf49Q9BVC5 232 aaPredicted RBP16.61■□□□□ 0.25
ACTB-207ENST00000462494 ADGRE2Q9UHX3 823 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 CPQQ9Y646 472 aa16.61■□□□□ 0.25
ACTB-207ENST00000462494 TRIM64A6NGJ6 449 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 K7EPI3 171 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 UPK1AO00322 258 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 SLC28A1O00337 649 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 ELK4P28324 431 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 GNPDA1P46926 289 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 CYP4F3Q08477 520 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 MAD2L1Q13257 205 aaPredicted RBP16.6■□□□□ 0.25
ACTB-207ENST00000462494 RAB39AQ14964 217 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 CRY1Q16526 586 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 GPRC6AQ5T6X5 926 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.6■□□□□ 0.252e-30■■■□□ 14.8
ACTB-207ENST00000462494 USP51Q70EK9 711 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 TSPAN33Q86UF1 283 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 GPR180Q86V85 440 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 ADAMTS19Q8TE59 1207 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 TRMT2BQ96GJ1 504 aaKnown RBP16.6■□□□□ 0.25
ACTB-207ENST00000462494 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 CARS2Q9HA77 564 aaKnown RBP16.6■□□□□ 0.25
ACTB-207ENST00000462494 LRTM1Q9HBL6 345 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 B4GAT1O43505 415 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 PGRP06401 933 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 EPB42P16452 691 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 STT3AP46977 705 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 ALDH3A2P51648 485 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 IST1P53990 364 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 AUTS2Q8WXX7 1259 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 ING2Q9H160 280 aa16.6■□□□□ 0.25
ACTB-207ENST00000462494 IFT80Q9P2H3 777 aaPredicted RBP16.6■□□□□ 0.25
ACTB-207ENST00000462494 DNMT3BQ9UBC3 853 aaKnown RBP16.6■□□□□ 0.25
ACTB-207ENST00000462494 ANAPC1Q9H1A4 1944 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 SCN5AQ14524 2016 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.59■□□□□ 0.25
ACTB-207ENST00000462494 KLHL33A6NCF5 533 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 H0Y858 1186 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
ACTB-207ENST00000462494 SPAM1P38567 509 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 LAPTM5Q13571 262 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 DAG1Q14118 895 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 CPSF6Q16630 551 aaKnown RBP eCLIP16.59■□□□□ 0.25
ACTB-207ENST00000462494 CCNYL2Q5T2Q4 361 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 SUSD1Q6UWL2 747 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 ZDHHC13Q8IUH4 622 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 PHACTR4Q8IZ21 702 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 FAM162AQ96A26 154 aa16.59■□□□□ 0.25
ACTB-207ENST00000462494 SDCCAG3Q96C92 435 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms