RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 TRIP6Q15654 476 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 CTF1Q16619 201 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 LBHQ53QV2 105 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 PPP6R3Q5H9R7 873 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 PARM1Q6UWI2 310 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TMEM182Q6ZP80 229 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 Q6ZSV7 163 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 KCTD9Q7L273 389 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 RABEPKQ7Z6M1 372 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 DZIP1Q86YF9 867 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 UXS1Q8NBZ7 420 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 C9orf43Q8TAL5 461 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 SLC44A1Q8WWI5 657 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 NSMAFQ92636 917 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SFXN2Q96NB2 322 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 HNRNPABQ99729 332 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 CMKLR1Q99788 373 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CPNE1Q99829 537 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 GTPBP2Q9BX10 602 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 WNT5BQ9H1J7 359 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 DPAGT1Q9H3H5 408 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 MYNNQ9NPC7 610 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TUBA8Q9NY65 449 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 SH3BGRL2Q9UJC5 107 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CPSF3Q9UKF6 684 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 PADI2Q9Y2J8 665 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 FHAD1B1AJZ9 1412 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SPAG9O60271 1321 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 PCF11O94913 1555 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 ABCA5Q8WWZ7 1642 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TMEM272A0A1B0GTI8 110 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 YDJCA8MPS7 323 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PLOD2O00469 737 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SLC30A4O14863 429 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 IKBKBO14920 756 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 AP5Z1O43299 807 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 BCAR3O75815 825 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 IFNA2P01563 188 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 RLN1P04808 185 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 UROSP10746 265 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ITIH1P19827 911 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TYMPP19971 482 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 KCNA5P22460 613 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 MPZP25189 248 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TKTP29401 623 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 STX2P32856 288 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 WNT5AP41221 380 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TPD52P55327 224 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 NME5P56597 212 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CLDN20P56880 219 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 UBASH3AP57075 661 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CD81P60033 236 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 STX1BP61266 288 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 MTX1Q13505 466 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 GPR18Q14330 331 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 NR1D2Q14995 579 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TAF7Q15545 349 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 HFEQ30201 348 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TWISTNBQ3B726 338 aaPredicted RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 PAPPA-AS1Q5QFB9 102 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 DCAF12L2Q5VW00 463 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 C18orf63Q68DL7 685 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 C15orf39Q6ZRI6 1047 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CTU1Q7Z7A3 348 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 CNTN4Q8IWV2 1026 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PM20D2Q8IYS1 436 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SLC5A8Q8N695 610 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ANKRD13CQ8N6S4 541 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 RTL3Q8N8U3 475 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 ATL1Q8WXF7 558 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 INPP5DQ92835 1189 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 FAM81BQ96LP2 452 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 SLC22A12Q96S37 553 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PKP4Q99569 1192 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 FEVQ99581 238 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PRSS22Q9GZN4 317 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 FN3KQ9H479 309 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 TSPY26PQ9H489 355 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 CATSPERBQ9H7T0 1116 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 C17orf75Q9HAS0 396 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 LMAN1LQ9HAT1 526 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 ANO10Q9NW15 660 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 FETUBQ9UGM5 382 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 HOOK1Q9UJC3 728 aaKnown RBP2.87□□□□□ -1.95
HPS3-203ENST00000460822 APPL1Q9UKG1 709 aa2.87□□□□□ -1.95
HPS3-203ENST00000460822 PRDM2Q13029 1718 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 PRSS51A0A1B0GVH4 220 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 C5orf52A6NGY3 159 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 MS4A18H0YCH9 400 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 SOCS6O14544 535 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 PPEF2O14830 753 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 EIF3DO15371 548 aaKnown RBP eCLIP2.86□□□□□ -1.95
HPS3-203ENST00000460822 SELENOFO60613 162 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 SOCS5O75159 536 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 OR2T7P0C7T2 308 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 LBPP18428 481 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 IL10P22301 178 aa2.86□□□□□ -1.95
HPS3-203ENST00000460822 ACAT1P24752 427 aaKnown RBP2.86□□□□□ -1.95
HPS3-203ENST00000460822 SOAT1P35610 550 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms