RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ACADMP11310 421 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NFKB1P19838 968 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ALAS2P22557 587 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CDKN1CP49918 316 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ALDH3A2P51648 485 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ATP6V0D1P61421 351 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TRAP1Q12931 704 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 USP10Q14694 798 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NFE2Q16621 373 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PRAMEF18Q5VWM3 479 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM179Q6ZVK1 233 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 KCNMB4Q86W47 210 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 LACC1Q8IV20 430 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 OR52H1Q8NGJ2 320 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 STON2Q8WXE9 905 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TM9SF4Q92544 642 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NXPE3Q969Y0 559 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SENP5Q96HI0 755 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TRAF4Q9BUZ4 470 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PORCNQ9H237 461 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 MIXL1Q9H2W2 232 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 RHOJQ9H4E5 214 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 POMKQ9H5K3 350 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 MEAF6Q9HAF1 191 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDHA10Q9Y5I2 948 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CLDN5O00501 218 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 AKAP8O43823 692 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 KRT75O95678 551 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PIGRP01833 764 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NR3C2P08235 984 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TNFRSF1BP20333 461 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PIK3CGP48736 1102 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CAV3P56539 151 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 RAB25P57735 213 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 DMP1Q13316 513 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 OR6B2Q6IFH4 312 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 DET1Q7L5Y6 550 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 EFL1Q7Z2Z2 1120 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 BCDIN3DQ7Z5W3 292 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PLPP6Q8IY26 295 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 GMCL1P1Q8NEA9 526 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF548Q8NEK5 533 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 OTUD5Q96G74 571 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CYP2S1Q96SQ9 504 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SERPINI1Q99574 410 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SH3GL1Q99961 368 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TUBA1CQ9BQE3 449 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 TEX13BQ9BXU2 312 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 UCK2Q9BZX2 261 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CDT1Q9H211 546 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SP110Q9HB58 689 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CCL27Q9Y4X3 112 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NYNRINQ9P2P1 1898 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 AKAP13Q12802 2813 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 A0A087WZ62 844 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 LOC100506127A0A0U1RQW1 187 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 OR2A25A4D2G3 310 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PDZK1P1A8MUH7 402 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PLK4O00444 970 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC9A3R1O14745 358 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 DCLK1O15075 740 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NDUFS6O75380 124 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 RPS6KA4O75676 772 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 LSM8O95777 96 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 APEX1P27695 318 aaKnown RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 HMGCLP35914 325 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 SH3BGRP55822 239 aaPredicted RBP4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF404Q494X3 552 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 THAP5Q7Z6K1 395 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 AMIGO1Q86WK6 493 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 PIK3R3Q92569 461 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 NT5C3BQ969T7 300 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CCDC17Q96LX7 622 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ATOH8Q96SQ7 321 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 WFDC6Q9BQY6 131 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 RHOBTB2Q9BYZ6 727 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ALG9Q9H6U8 611 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 BTBD3Q9Y2F9 522 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 ACTL7AQ9Y615 435 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 KCNMB2Q9Y691 235 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 CLCA3PQ9Y6N3 262 aa4.46□□□□□ -1.7
DEPDC1-202ENST00000456315 COL5A3P25940 1745 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 A0A087X1B8 175 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 TRBV5-3A0A0A0MS03 114 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 A0A1B0GVC2 190 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 A6NIN4 97 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 YJEFN3A6XGL0 299 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ATP6V1G2-DDX39BF2Z307 99 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 M0QYV0 167 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 RAD51BO15315 384 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 LANCL1O43813 399 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 IDH3BO43837 385 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 PLOD3O60568 738 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 RGS11O94810 467 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 FADS2O95864 444 aaKnown RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 RECKO95980 971 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 IL7P13232 177 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SOX3P41225 446 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms