RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 WDR37Q9Y2I8 494 aa13.98□□□□□ -0.17
ERCC3-203ENST00000445889 M0QZQ0 153 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 KDM1AO60341 852 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 CYP11A1P05108 521 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 RAB15P59190 212 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 NCS1P62166 190 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TRIM32Q13049 653 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TUBA3CQ13748 450 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 GTF2H3Q13889 308 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 BTG3Q14201 252 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 MAPKAPK3Q16644 382 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 RBM48Q5RL73 367 aaKnown RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 LAIR1Q6GTX8 287 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 ATP6V0D2Q8N8Y2 350 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 YIPF2Q9BWQ6 316 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 BOCQ9BWV1 1114 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 OSBPL10Q9BXB5 764 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 NLE1Q9NVX2 485 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 VNN3Q9NY84 501 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 KLQ9UEF7 1012 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 KRT87PA6NCN2 255 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 SLC1A7O00341 560 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 LRATO95237 230 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 OGNP20774 298 aaKnown RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 SLC6A4P31645 630 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 CTF1Q16619 201 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 ADPRMQ3LIE5 342 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 ZNF513Q8N8E2 541 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TSPEARQ8WU66 669 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 HDAC2Q92769 488 aaKnown RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 CNDP2Q96KP4 475 aaKnown RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 RIBC2Q9H4K1 309 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 PALMDQ9NP74 551 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 RASSF1Q9NS23 344 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TSC22D4Q9Y3Q8 395 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 USP34Q70CQ2 3546 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 HTR3EA5X5Y0 456 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 MYO1GB0I1T2 1018 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 M0R3G1 203 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 NDUFS2O75306 463 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 NADKO95544 446 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 SERPINA1P01009 418 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 SGSHP51688 502 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 ISL1P61371 349 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 CYP4F3Q08477 520 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 PWP1Q13610 501 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 OXA1LQ15070 435 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 MAPRE1Q15691 268 aaKnown RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TMEM53Q6P2H8 277 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 MSRB3Q8IXL7 192 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 OR7A2PQ8NGA2 310 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 SLC13A3Q8WWT9 602 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 GTF2H4Q92759 462 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 TRIB3Q96RU7 358 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 EGFL8Q99944 293 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 CINPQ9BW66 212 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 VPS51Q9UID3 782 aa13.97□□□□□ -0.17
ERCC3-203ENST00000445889 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
ERCC3-203ENST00000445889 C2orf81A6NN90 581 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 H0Y626 953 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 CXCR6O00574 342 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 ANKRD28O15084 1053 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 TULP3O75386 442 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 SEC22BO75396 215 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 TRIM16O95361 564 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 EFNA1P20827 205 aaPredicted RBP13.96□□□□□ -0.17
ERCC3-203ENST00000445889 PSMB9P28065 219 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 PPP2R2BQ00005 443 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 TWF1Q12792 350 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 GTF2H2Q13888 395 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 CBX2Q14781 532 aaPredicted RBP13.96□□□□□ -0.17
ERCC3-203ENST00000445889 ZNF846Q147U1 533 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 GTF2H2CQ6P1K8 395 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 NECAB2Q7Z6G3 386 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 LIX1Q8N485 282 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 NKAPQ8N5F7 415 aaKnown RBP13.96□□□□□ -0.17
ERCC3-203ENST00000445889 MCOLN3Q8TDD5 553 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 MAGED4Q96JG8 741 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 SUSD3Q96L08 255 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 KLHL25Q9H0H3 589 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 HMG20AQ9NP66 347 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 ATAD3AQ9NVI7 634 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 SCML2Q9UQR0 700 aa13.96□□□□□ -0.17
ERCC3-203ENST00000445889 STX7O15400 261 aaKnown RBP13.96□□□□□ -0.18
ERCC3-203ENST00000445889 ZNF682O95780 498 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 FADS2O95864 444 aaKnown RBP13.96□□□□□ -0.18
ERCC3-203ENST00000445889 HOXD9P28356 352 aaPredicted RBP13.96□□□□□ -0.18
ERCC3-203ENST00000445889 HTR7P34969 479 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 DCTP40126 519 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 KCNC4Q03721 635 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 MAP2K5Q13163 448 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 PON2Q15165 354 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 INAQ16352 499 aa13.96□□□□□ -0.18
ERCC3-203ENST00000445889 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.18
ERCC3-203ENST00000445889 RHBDF1Q96CC6 855 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms