RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CD244Q9BZW8 370 aa20.68■□□□□ 0.9
PTPRF-207ENST00000436724 AKTIPQ9H8T0 292 aa20.68■□□□□ 0.9
PTPRF-207ENST00000436724 IPPKQ9H8X2 491 aa20.68■□□□□ 0.9
PTPRF-207ENST00000436724 KPNA5O15131 536 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 KATNA1O75449 491 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 KRT36O76013 467 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 SLCO2B1O94956 709 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 ADH1BP00325 375 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 ASGR2P07307 311 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 C5AR1P21730 350 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 GCKP35557 465 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 RAP1GDS1P52306 607 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 SLC25A3Q00325 362 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 NLRP8Q86W28 1048 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 SLC44A3Q8N4M1 653 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 CFAP61Q8NHU2 1237 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 ZNF382Q96SR6 550 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 SLC12A9Q9BXP2 914 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 PARVBQ9HBI1 364 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 ATXN10Q9UBB4 475 aa20.67■□□□□ 0.9
PTPRF-207ENST00000436724 PRR23AA6NEV1 266 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 GIPC1O14908 333 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 UBDO15205 165 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 COL9A1P20849 921 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 CPOXP36551 454 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 ABRQ12979 859 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 SYTL3Q4VX76 610 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 CHSY3Q70JA7 882 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 TRAPPC5Q8IUR0 188 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 CCM2Q9BSQ5 444 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.66■□□□□ 0.9
PTPRF-207ENST00000436724 GFYI3L273 518 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 QSOX1O00391 747 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 NPC1O15118 1278 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 KLF8O95600 359 aaPredicted RBP20.66■□□□□ 0.9
PTPRF-207ENST00000436724 PCCBP05166 539 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 ANXA5P08758 320 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 MPC1LP0DKB6 136 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 PDHA2P29803 388 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 NAA20P61599 178 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 ZNF776Q68DI1 518 aaPredicted RBP20.66■□□□□ 0.9
PTPRF-207ENST00000436724 SNX32Q86XE0 403 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 OR4F6Q8NGB9 312 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 OR2T3Q8NH03 318 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 GANCQ8TET4 914 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 KLK6Q92876 244 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 ATP6V1E2Q96A05 226 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 TMEM159Q96B96 161 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 OPTCQ9UBM4 332 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 TMEM98Q9Y2Y6 226 aa20.66■□□□□ 0.9
PTPRF-207ENST00000436724 PCYT1BQ9Y5K3 369 aaPredicted RBP20.66■□□□□ 0.9
PTPRF-207ENST00000436724 COL4A2P08572 1712 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 A0A1W2PQF6 199 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 LILRB5O75023 590 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 TM7SF2O76062 418 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 PSMG1O95456 288 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 C8GP07360 202 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 UROSP10746 265 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 GRB7Q14451 532 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 RCN1Q15293 331 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 ZNF547Q8IVP9 402 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 HMGCLL1Q8TB92 370 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 HBEGFQ99075 208 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 GABRG3Q99928 467 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 FBXL12Q9NXK8 326 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 CIDEBQ9UHD4 219 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 POLG2Q9UHN1 485 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 PRKAB1Q9Y478 270 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 ALDOCP09972 364 aaKnown RBP20.65■□□□□ 0.9
PTPRF-207ENST00000436724 HOXB2P14652 356 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 ZNF8P17098 575 aaPredicted RBP20.65■□□□□ 0.9
PTPRF-207ENST00000436724 TRAF3Q13114 568 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 WSCD2Q2TBF2 565 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 NRG4Q8WWG1 115 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 PYCR2Q96C36 320 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 TUBGCP3Q96CW5 907 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 CLPTM1LQ96KA5 538 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 LGR4Q9BXB1 951 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 TRIM39Q9HCM9 518 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 STOML1Q9UBI4 398 aa20.65■□□□□ 0.9
PTPRF-207ENST00000436724 SLC5A10A0PJK1 596 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 NARSO43776 548 aaKnown RBP20.64■□□□□ 0.89
PTPRF-207ENST00000436724 CAPN1P07384 714 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 CUL3Q13618 768 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 STARD3Q14849 445 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 CMPK2Q5EBM0 449 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 SDE2Q6IQ49 451 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 PNCKQ6P2M8 343 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 CRTC3Q6UUV7 619 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 HEATR4Q86WZ0 1026 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 RALGPS2Q86X27 583 aaPredicted RBP20.64■□□□□ 0.89
PTPRF-207ENST00000436724 MBNL1Q9NR56 388 aaKnown RBP20.64■□□□□ 0.89
PTPRF-207ENST00000436724 ZFR2Q9UPR6 939 aaKnown RBP20.64■□□□□ 0.89
PTPRF-207ENST00000436724 ANGPTL3Q9Y5C1 460 aa20.64■□□□□ 0.89
PTPRF-207ENST00000436724 ZFC3H1O60293 1989 aaKnown RBP20.64■□□□□ 0.89
PTPRF-207ENST00000436724 K7EPI3 171 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 AP1G1O43747 822 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 STK16O75716 305 aa20.63■□□□□ 0.89
PTPRF-207ENST00000436724 PAK4O96013 591 aaPredicted RBP20.63■□□□□ 0.89
PTPRF-207ENST00000436724 HIST1H2AGP0C0S8 130 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms