RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 IQCF5A8MTL0 148 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 CCDC188H7C350 402 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 CCR7P32248 378 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 SEPHS1P49903 392 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 DR1Q01658 176 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 DHX34Q14147 1143 aaKnown RBP25.7■■□□□ 1.7
CDK9-202ENST00000421939 ANKRD20A4Q4UJ75 823 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 RNF187Q5TA31 235 aaPredicted RBP25.7■■□□□ 1.7
CDK9-202ENST00000421939 ANKS6Q68DC2 871 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 PTRHD1Q6GMV3 140 aaKnown RBP25.7■■□□□ 1.7
CDK9-202ENST00000421939 HOOK3Q86VS8 718 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 AGGF1Q8N302 714 aaeCLIP25.7■■□□□ 1.7
CDK9-202ENST00000421939 TEFMQ96QE5 360 aaKnown RBP25.7■■□□□ 1.7
CDK9-202ENST00000421939 FBXO8Q9NRD0 319 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 MAD1L1Q9Y6D9 718 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 RPS6KL1Q9Y6S9 549 aa25.7■■□□□ 1.7
CDK9-202ENST00000421939 UBA6A0AVT1 1052 aaPredicted RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 BHMG1C9JSJ3 638 aaPredicted RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 OGNP20774 298 aaKnown RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 RPS3P23396 243 aaKnown RBP eCLIP25.69■■□□□ 1.7
CDK9-202ENST00000421939 ACADLP28330 430 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 CSE1LP55060 971 aaKnown RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 DNTTIP2Q5QJE6 756 aaKnown RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 IZUMO3Q5VZ72 239 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 ARMC6Q6NXE6 501 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 PCGF5Q86SE9 256 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 TMEM135Q86UB9 458 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 PHC3Q8NDX5 983 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 LCN9Q8WX39 176 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 KLHL6Q8WZ60 621 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 FCRL3Q96P31 734 aaPredicted RBP25.69■■□□□ 1.7
CDK9-202ENST00000421939 SRMSQ9H3Y6 488 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 SEMA5BQ9P283 1151 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 ASF1AQ9Y294 204 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 SSUH2Q9Y2M2 353 aa25.69■■□□□ 1.7
CDK9-202ENST00000421939 TLCD2A6NGC4 264 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 STMND1H3BQB6 276 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 PFDN6O15212 129 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 EIF3BP55884 814 aaKnown RBP25.68■■□□□ 1.7
CDK9-202ENST00000421939 TMPRSS3P57727 454 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 TMED2Q15363 201 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 TGIF1Q15583 401 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 NEPROQ6NW34 567 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 CEACAM20Q6UY09 585 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 SLC22A15Q8IZD6 547 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 KRT222Q8N1A0 295 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 OR4E2Q8NGC2 313 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 OR52E1Q8NGJ3 308 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 OR5AR1Q8NGP9 310 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 ASZ1Q8WWH4 475 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 UBXN4Q92575 508 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 LPGAT1Q92604 370 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 SIGLEC10Q96LC7 697 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 PANX3Q96QZ0 392 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 TCF12Q99081 682 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 CTRCQ99895 268 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 TFB2MQ9H5Q4 396 aaKnown RBP25.68■■□□□ 1.7
CDK9-202ENST00000421939 PRORYQ9H606 182 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 WDR70Q9NW82 654 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 IL1RAPL1Q9NZN1 696 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 SDK2Q58EX2 2172 aa25.68■■□□□ 1.7
CDK9-202ENST00000421939 ZCWPW2A0A1B0GU75 182 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 USP1O94782 785 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 APOA4P06727 396 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 IVDP26440 423 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 AOAHP28039 575 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 ETF1P62495 437 aaKnown RBP25.67■■□□□ 1.7
CDK9-202ENST00000421939 HSPA14Q0VDF9 509 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 PRKAA1Q13131 559 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 PRKG2Q13237 762 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 DTX1Q86Y01 620 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 STAMBPL1Q96FJ0 436 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 MAP3K3Q99759 626 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 ZPBPQ9BS86 351 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 TRIT1Q9H3H1 467 aaKnown RBP25.67■■□□□ 1.7
CDK9-202ENST00000421939 APMAPQ9HDC9 416 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 CDYLQ9Y232 598 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 PCDHB11Q9Y5F2 797 aa25.67■■□□□ 1.7
CDK9-202ENST00000421939 IGHV5-51A0A0C4DH38 117 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 MATN2O00339 956 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 POLR1CO15160 346 aaPredicted RBP25.66■■□□□ 1.7
CDK9-202ENST00000421939 GPC4O75487 556 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 NELFEP18615 380 aaKnown RBP25.66■■□□□ 1.7
CDK9-202ENST00000421939 POLR2CP19387 275 aaPredicted RBP25.66■■□□□ 1.7
CDK9-202ENST00000421939 CXADRP78310 365 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 SH3BP2P78314 561 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 FOXM1Q08050 763 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 CTSL3PQ5NE16 218 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 ZNF470Q6ECI4 717 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 CILP2Q8IUL8 1156 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 TBC1D21Q8IYX1 336 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 SLC41A2Q96JW4 573 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 TRIM51Q9BSJ1 452 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 CPNE5Q9HCH3 593 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 VPS9D1Q9Y2B5 631 aa25.66■■□□□ 1.7
CDK9-202ENST00000421939 LOC400499M0QZD8 3231 aa25.65■■□□□ 1.7
CDK9-202ENST00000421939 TTI1O43156 1089 aa25.65■■□□□ 1.7
CDK9-202ENST00000421939 CASQ1P31415 396 aa25.65■■□□□ 1.7
CDK9-202ENST00000421939 KPNA2P52292 529 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms