RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 OGDHLQ9ULD0 1010 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 COL4A5P29400 1685 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 PABPN1LA6NDY0 278 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 MEIS3P2A8K0S8 358 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 GDF5P43026 501 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 FAM189BP81408 668 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 LCN8Q6JVE9 175 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 ZNF517Q6ZMY9 492 aaPredicted RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 CCDC28AQ8IWP9 274 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 FAM217AQ8IXS0 508 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 OR52J3Q8NH60 311 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 RHOXF1Q8NHV9 184 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 PSMG2Q969U7 264 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 TSSK3Q96PN8 268 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 YTHDF1Q9BYJ9 559 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 SP140LQ9H930 580 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 TAS2R13Q9NYV9 303 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 EIF3LQ9Y262 564 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 ZNF451Q9Y4E5 1061 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 USP3Q9Y6I4 520 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 FAM172BPA6NC97 362 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 UQCRC1P31930 480 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 PTGS2P35354 604 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 SLC26A3P40879 764 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 SLC15A1P46059 708 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 GHRHRQ02643 423 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 BCL7AQ4VC05 210 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 ZNF648Q5T619 568 aaPredicted RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 RAB43Q86YS6 212 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 DCP2Q8IU60 420 aaKnown RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 COLGALT2Q8IYK4 626 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 CFAP52Q8N1V2 620 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 TP53I13Q8NBR0 393 aaPredicted RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 PIK3C3Q8NEB9 887 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 FYTTD1Q96QD9 318 aaKnown RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 MALT1Q9UDY8 824 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 PRKAB1Q9Y478 270 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 KIAA1217Q5T5P2 1943 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 SLC12A8A0AV02 714 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 SERPINA1P01009 418 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 MYL3P08590 195 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 RAP2AP10114 183 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 POU2F1P14859 743 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 BRCC3P46736 316 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 TWF1Q12792 350 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 LCP2Q13094 533 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 CPSF6Q16630 551 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDR1-232ENST00000418800 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 GPRIN3Q6ZVF9 776 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 ADHFE1Q8IWW8 467 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 C2CD4AQ8NCU7 369 aaPredicted RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 OR52B6Q8NGF0 335 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 OR2B2Q9GZK3 357 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 CPNE5Q9HCH3 593 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 EVPLLA8MZ36 301 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 FAM25AB3EWG3 89 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 FAM25CB3EWG5 89 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 FAM25GB3EWG6 89 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 NBNO60934 754 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 PON2Q15165 354 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 CTF1Q16619 201 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 DDR2Q16832 855 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 UGT3A2Q3SY77 523 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 PXDC1Q5TGL8 231 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 BLOC1S3Q6QNY0 202 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 TMEM207Q6UWW9 146 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 SPRED1Q7Z699 444 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 NRARPQ7Z6K4 114 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 OR8H1Q8NGG4 311 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 JPH3Q8WXH2 748 aaPredicted RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 VPS35Q96QK1 796 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 RBM4BQ9BQ04 359 aaKnown RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 TRMOQ9BU70 441 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 ZSCAN5AQ9BUG6 496 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 RBM4Q9BWF3 364 aaKnown RBP11.51□□□□□ -0.57
DDR1-232ENST00000418800 TXNRD2Q9NNW7 524 aa11.51□□□□□ -0.57
DDR1-232ENST00000418800 IGKV6D-21A0A0A0MT36 114 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 SAGE2PA6NJ88 616 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 GPR182O15218 404 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 NIPSNAP2O75323 286 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 CPNE6O95741 557 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 TBX18O95935 607 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 COL6A1P12109 1028 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 SOX6P35712 828 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 MAGEA12P43365 314 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
DDR1-232ENST00000418800 CRY1Q16526 586 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 TYSND1Q2T9J0 566 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 DCAF4L1Q3SXM0 396 aa11.5□□□□□ -0.57
DDR1-232ENST00000418800 LBX2Q6XYB7 198 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms