RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 MAOBP27338 520 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 BRCC3P46736 316 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 ELOAQ14241 798 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 GRM7Q14831 915 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 KIF19Q2TAC6 998 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 CENPLQ8N0S6 344 aaPredicted RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 AGBL3Q8NEM8 1001 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 FCGR1BQ92637 280 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 ZNF416Q9BWM5 594 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 EIF2B3Q9NR50 452 aaKnown RBP15.48■□□□□ 0.07
RTN3-205ENST00000356000 DNAJB9Q9UBS3 223 aa15.48■□□□□ 0.07
RTN3-205ENST00000356000 RPS10-NUDT3A0A1W2PQS6 291 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TSC22D2O75157 780 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 RRASP10301 218 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 ALAS2P22557 587 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 HOXA1P49639 335 aaPredicted RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 WNT7BP56706 349 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 RBP5P82980 135 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 ALDH6A1Q02252 535 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 GRM3Q14832 879 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 ANGPT1Q15389 498 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 FAM98BQ52LJ0 330 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 CLLU1Q5K131 121 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 KDM4DQ6B0I6 523 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 C18orf25Q96B23 403 aaPredicted RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 AP2M1Q96CW1 435 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SGTBQ96EQ0 304 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TBATAQ96M53 351 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 C12orf57Q99622 126 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PAPPA2Q9BXP8 1791 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PTPRJQ12913 1337 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 A0A1W2PQ09 198 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 F8W810 466 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 DFFAO00273 331 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 HS6ST1O60243 411 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SOX6P35712 828 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 POU4F3Q15319 338 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 RFX4Q33E94 735 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TFAP2EQ6VUC0 442 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 CUZD1Q86UP6 607 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 RASAL3Q86YV0 1011 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 FRS2Q8WU20 508 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 GPR22Q99680 433 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 OMDQ99983 421 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PITHD1Q9GZP4 211 aaPredicted RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 SHARPINQ9H0F6 387 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 POMKQ9H5K3 350 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 EML4Q9HC35 981 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 SLC52A3Q9NQ40 469 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 A0A075B6Q4 140 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 STX16O14662 325 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 KPNA6O60684 536 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 RFPL3O75679 317 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 ASS1P00966 412 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 SLC35E2BP0CK96 405 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SDC4P31431 198 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 GRK5P34947 590 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 CHRNB3Q05901 458 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SCN1BQ07699 218 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TAB1Q15750 504 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 STXBP2Q15833 593 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PRSS36Q5K4E3 855 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 BSPRYQ5W0U4 402 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 SLC46A3Q7Z3Q1 461 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 NECAB2Q7Z6G3 386 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 XYLT1Q86Y38 959 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 OR7G3Q8NG95 312 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TFAP2BQ92481 460 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 Q96MT0 163 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 GPR78Q96P69 363 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 MCCC1Q96RQ3 725 aaPredicted RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 CGRRF1Q99675 332 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TEKT3Q9BXF9 490 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PCDHB16Q9NRJ7 776 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 PCDHB5Q9Y5E4 795 aa15.47■□□□□ 0.07
RTN3-205ENST00000356000 TNPO3Q9Y5L0 923 aaKnown RBP15.47■□□□□ 0.07
RTN3-205ENST00000356000 SMLR1H3BR10 107 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 PRPSAP2O60256 369 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 F9P00740 461 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 MAPKAPK2P49137 400 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 CDH13P55290 713 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 PCBP1Q15365 356 aaKnown RBP eCLIP15.46■□□□□ 0.079e-12■■□□□ 13.5
RTN3-205ENST00000356000 TRIM60Q495X7 471 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 CST9Q5W186 159 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 HEATR6Q6AI08 1181 aaKnown RBP15.46■□□□□ 0.07
RTN3-205ENST00000356000 LIMS2Q7Z4I7 341 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 GDPD1Q8N9F7 314 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 RBPMSQ93062 196 aaKnown RBP15.46■□□□□ 0.07
RTN3-205ENST00000356000 MRPL57Q9BQC6 102 aaKnown RBP15.46■□□□□ 0.07
RTN3-205ENST00000356000 RNF167Q9H6Y7 350 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 AASSQ9UDR5 926 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 CYTH4Q9UIA0 394 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 MAGEL2Q9UJ55 1249 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 V9GYH0 126 aa15.46■□□□□ 0.07
RTN3-205ENST00000356000 ERN1O75460 977 aaKnown RBP15.46■□□□□ 0.06
RTN3-205ENST00000356000 ATP6AP2O75787 350 aa15.46■□□□□ 0.06
RTN3-205ENST00000356000 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms