RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TRIM77I1YAP6 450 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 POLR1CO15160 346 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CDH16O75309 829 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CFIP05156 583 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 HSPA13P48723 471 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ITKQ08881 620 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CETN1Q12798 172 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 GALEQ14376 348 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CCNJQ5T5M9 372 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ADAMTSL4Q6UY14 1074 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ERN2Q76MJ5 926 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 AMIGO2Q86SJ2 522 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 SRRM1Q8IYB3 904 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 BBOF1Q8ND07 529 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 RFWD2Q8NHY2 731 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 HMGB4Q8WW32 186 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CYP8B1Q9UNU6 501 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ZNF451Q9Y4E5 1061 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 KLK4Q9Y5K2 254 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 A0A087X0T9 212 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 A0A0B4J203 849 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 IQANK1A0A1B0GTG1 560 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 I3L4J1 428 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 PSMD12O00232 456 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 NUAK1O60285 661 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 PMPCBO75439 489 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ZMPSTE24O75844 475 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 SORBS2O94875 1100 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 TGDSO95455 350 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 OR4Q2P0C623 313 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 FAM228BP0C875 321 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 FDXRP22570 491 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 GPD2P43304 727 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CLK1P49759 484 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CASP5P51878 434 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CCNIQ14094 377 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 TRIP10Q15642 601 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 TBCELQ5QJ74 424 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ANKRD40Q6AI12 368 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 SCARA3Q6AZY7 606 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 KIAA1211LQ6NV74 962 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 FIP1L1Q6UN15 594 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 IGFL2Q6UWQ7 119 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ELMOD2Q8IZ81 293 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 RBM15BQ8NDT2 890 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ZNF420Q8TAQ5 688 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 CAPSLQ8WWF8 208 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 ZUFSPQ96AP4 578 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 C12orf43Q96C57 262 aaKnown RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 THAP11Q96EK4 314 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 MCCC1Q96RQ3 725 aaPredicted RBP7.21□□□□□ -1.26
ZNF540-202ENST00000343599 HERPUD2Q9BSE4 406 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 KCNK13Q9HB14 408 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 POPDC2Q9HBU9 364 aa7.21□□□□□ -1.26
ZNF540-202ENST00000343599 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 EFSO43281 561 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 MSI1O43347 362 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NOBOXO60393 691 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 CCNT2O60583 730 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 GABBR2O75899 941 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 RASGRP1O95267 797 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 GCNT3O95395 438 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 TTC4O95801 387 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 KLKB1P03952 638 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 CHRNA3P32297 505 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 GALNT2Q10471 571 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 CUL2Q13617 745 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NFATC4Q14934 902 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 PARP15Q460N3 678 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 ZBED5Q49AG3 693 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 TDRD12Q587J7 1177 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 CERCAMQ5T4B2 595 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 TP53I13Q8NBR0 393 aaPredicted RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 PHF10Q8WUB8 498 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 PYDC1Q8WXC3 89 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 MAML1Q92585 1016 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NINJ1Q92982 152 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 RELTQ969Z4 430 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 C14orf79Q96F83 325 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 GPR174Q9BXC1 333 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 SDCBP2Q9H190 292 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 SLC25A18Q9H1K4 315 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 SERHL2Q9H4I8 314 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 RMND5AQ9H871 391 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 SCPEP1Q9HB40 452 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NEK6Q9HC98 313 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NENFQ9UMX5 172 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 AP4B1Q9Y6B7 739 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 A0A1W2PQH9 124 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 LTFP02788 710 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NR3C1P04150 777 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 FGF5P12034 268 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 CD72P21854 359 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 DGKAP23743 735 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 GABRB3P28472 473 aa7.2□□□□□ -1.26
ZNF540-202ENST00000343599 NMT1P30419 496 aaKnown RBP7.2□□□□□ -1.26
ZNF540-202ENST00000343599 HLA-FP30511 346 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms