RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 PCDHGA11Q9Y5H2 935 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 DAPL1A0PJW8 107 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RPL13AP40429 203 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 EEF1A2Q05639 463 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 PCDH20Q8N6Y1 951 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZNF670Q9BS34 389 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 POTEKPQ9BYX7 375 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SEMA6CQ9H3T2 930 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 TBC1D17Q9HA65 648 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CXorf21Q9HAI6 301 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CRTAC1Q9NQ79 661 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 MIOSQ9NXC5 875 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 PRR12Q9ULL5 1215 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RAB19A4D1S5 217 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZNF99A8MXY4 864 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 PLGP00747 810 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 MT-ND2P03891 347 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 BCKDHAP12694 445 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ANXA8P13928 327 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CRISP3P54108 245 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RRAS2P62070 204 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 FAAP100Q0VG06 881 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 FTMTQ8N4E7 242 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RAD9AQ99638 391 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SLC6A16Q9GZN6 736 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NFASCO94856 1347 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RIC1Q4ADV7 1423 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 STMND1H3BQB6 276 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ACOX3O15254 700 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 TCEA1P23193 301 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 POLR2JP52435 117 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NDST1P52848 882 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RPL6Q02878 288 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 DSG2Q14126 1118 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ARL6IP1Q15041 203 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 DCST2Q5T1A1 773 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SLC15A3Q8IY34 581 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZSCAN1Q8NBB4 408 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CPT1CQ8TCG5 803 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ELMO3Q96BJ8 720 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 MKKSQ9NPJ1 570 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 TAS2R3Q9NYW6 316 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SIX4Q9UIU6 781 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 QRICH2Q9H0J4 1663 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NUDT17P0C025 328 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 EIF4BP23588 611 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.352e-6■■■■□ 24.2
POLR1A-201ENST00000263857 PCK2Q16822 640 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RABL3Q5HYI8 236 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 EXOSC6Q5RKV6 272 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 C9orf64Q5T6V5 341 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SMARCD3Q6STE5 483 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SLC43A3Q8NBI5 491 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RHOJQ9H4E5 214 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NINJ2Q9NZG7 142 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NUDT7P0C024 238 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CD86P42081 329 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ALDH3B1P43353 468 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ART1P52961 327 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 NKX6-1P78426 367 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 BAATQ14032 418 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ATAD3CQ5T2N8 411 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SLC37A3Q8NCC5 494 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZBED6CLQ96FA7 236 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CCDC32Q9BV29 185 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 OR2B2Q9GZK3 357 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 GDF3Q9NR23 364 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZNF282Q9UDV7 671 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 TMX2Q9Y320 296 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 AP1M2Q9Y6Q5 423 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SNX3O60493 162 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 C8BP07358 591 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 THBS3P49746 956 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CASP9P55211 416 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 GAD2Q05329 585 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CHCHD4Q8N4Q1 142 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 C12orf50Q8NA57 414 aaPredicted RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CD72P21854 359 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 CXCR3P49682 368 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 MRPL49Q13405 166 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RNASE12Q5GAN4 147 aaKnown RBP6.63□□□□□ -1.35
POLR1A-201ENST00000263857 KIAA0319Q5VV43 1072 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 OR56B2PQ8NGI1 322 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 WNT8BQ93098 351 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 ZFP3Q96NJ6 502 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SLC30A2Q9BRI3 323 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SEMA4AQ9H3S1 761 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 SDHAF2Q9NX18 166 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 RALGAPA1Q6GYQ0 2036 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 LOC100509620A0A075B734 347 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 PP2D1A8MPX8 630 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 BOLA2-SMG1P6H3BVE0 249 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 B3GALT2O43825 422 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 GMDSO60547 372 aa6.63□□□□□ -1.35
POLR1A-201ENST00000263857 LILRB5O75023 590 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms