RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Q80VP5 184 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Cdh7Q8BM92 785 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Dnajc24Q91ZF0 196 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 FancgQ9EQR6 623 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Fam155bA2BDP1 471 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Ebf3O08791 596 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 SPINDOCQ05AH6 381 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Lrrc14bQ3UJB3 510 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gpr65Q61038 337 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Acat3Q80X81 397 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Cadm2Q8BLQ9 435 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Znf276Q8CE64 614 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Olfr784Q8VFZ9 319 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Pcdhga3Q91XY5 928 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Pcdha8Q91Y12 946 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Reep3Q99KK1 254 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Msantd3Q9CR78 275 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 TescQ9JKL5 214 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Tcea2Q9QVN7 299 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Trip11E9Q512 1976 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Fam205a1D3YZF6 1314 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Psen1P49769 467 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Brms1lQ3U1T3 323 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Olfr20Q7TRX9 314 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Arl5aQ80ZU0 179 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Q8BHG2 160 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Exd1Q8CDF7 570 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Tmem221Q8K071 230 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 PdgfdQ925I7 370 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Ppp1r3gQ9CW07 347 aa13.78□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Arl16B1ATY8 173 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 4930595D18RikD3Z642 64 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Srp54bE9PXC0 504 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 PrlP06879 226 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 PrkchP23298 683 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Cbx2P30658 519 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 VldlrP98156 873 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Capn15Q9JLG8 1095 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Prmt2Q9R144 448 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gm12394A2AKP6 982 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gp5O08742 567 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 CatP24270 527 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Trp53i11Q4QQM4 189 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Tgm6Q8BM11 706 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Olfr818Q8VG46 318 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gkn2Q9CQS6 184 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Pcdhgb8A0A140LI48 931 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Atp6ap1lD3Z5W0 336 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Vmn2r120E9PX34 856 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gm21103E9Q2Q1 267 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Acvr2aP27038 513 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Rab5bP61021 215 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Gata5P97489 404 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Slc16a10Q3U9N9 512 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Eml4Q3UMY5 988 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Ccdc184Q8BMK5 191 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Ldhal6bQ8BVP2 382 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 IrgcQ8C262 412 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Krt33aQ8K0Y2 404 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Bco2Q99NF1 532 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Slco6d1Q9D5W6 683 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Armc1Q9D7A8 282 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Exosc1Q9DAA6 195 aaKnown RBP13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Rdh14Q9ERI6 334 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Il21Q9ES17 146 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 TsnaxQ9QZE7 290 aaKnown RBP13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 DgkeQ9R1C6 564 aa13.77□□□□□ -0.2
Col5a1-201ENSMUST00000028280 Amd2D3Z6H8 334 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm8020F6WLE9 229 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Amd1P0DMN7 334 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gsk3aQ2NL51 490 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Antxr2Q6DFX2 487 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Scaf8Q6DID3 1268 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr45Q8VGM1 311 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mrpl49Q9CQ40 166 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PglsQ9CQ60 257 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Asf1aQ9CQE6 204 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Ripk3Q9QZL0 486 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PtgfrnQ9WV91 879 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Keap1Q9Z2X8 624 aaKnown RBP13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gm2022A0A1Y7VLT7 144 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Acsl1P41216 699 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Rpl22P67984 128 aaKnown RBP13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Apba2P98084 750 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 PgrQ00175 926 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Olfr1152Q7TR34 310 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Map2k7Q8CE90 535 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Chp2Q9D869 196 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tll2Q9WVM6 1012 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 HnrnpfQ9Z2X1 415 aaKnown RBP13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Sh3pxd2aO89032 1124 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Serpine1P22777 402 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Tbx4P70325 552 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Zfp874aQ8BX23 447 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Cpt1bQ924X2 772 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Gstt3Q99L20 241 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Psmb10O35955 273 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Mup4P11590 178 aa13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Timm8bP62077 83 aaKnown RBP13.77□□□□□ -0.21
Col5a1-201ENSMUST00000028280 Bnip1Q6QD59 228 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms