RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	AGBL3	Q8NEM8	1001 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	VPS33A	Q96AX1	596 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	DGAT2	Q96PD7	388 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	GBP5	Q96PP8	586 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	SPAG5	Q96R06	1193 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	FAM110A	Q9BQ89	295 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	CCDC106	Q9BWC9	280 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	CD209	Q9NNX6	404 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	IL36RN	Q9UBH0	155 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	ZNF580	Q9UK33	172 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	PADI1	Q9ULC6	663 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	ERVK-11	Q9UQG0	969 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	PTGDR2	Q9Y5Y4	395 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	CEPT1	Q9Y6K0	416 aa		5.68	□□□□□ -1.5
NRXN1-223	ENST00000625891	RBBP6	Q7Z6E9	1792 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	COL6A3	P12111	3177 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	TRBC2	A0A5B9	178 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CLEC18A	A5D8T8	446 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891		J3KR12	359 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	WDR46	O15213	610 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	OAZ2	O95190	189 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	BAG2	O95816	211 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	FYN	P06241	537 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	MMP2	P08253	660 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	NAGA	P17050	411 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CD58	P19256	250 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	TRIM21	P19474	475 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	MUT	P22033	750 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CHAT	P28329	748 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	PRCP	P42785	496 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	GYG1	P46976	350 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	PGGT1B	P53609	377 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	MRPS34	P82930	218 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	ARHGEF6	Q15052	776 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CDC37	Q16543	378 aa	Predicted RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	TWISTNB	Q3B726	338 aa	Predicted RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	ZNF628	Q5EBL2	1059 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	RARS2	Q5T160	578 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CST9LP1	Q5W188	147 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	PLEKHA7	Q6IQ23	1121 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	C9orf47	Q6ZRZ4	202 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	DENND5B	Q6ZUT9	1274 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	METTL23	Q86XA0	190 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	PALB2	Q86YC2	1186 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CLEC18C	Q8NCF0	446 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	TSPAN14	Q8NG11	270 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	HUS1B	Q8NHY5	278 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	ARRDC2	Q8TBH0	407 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	CD99L2	Q8TCZ2	262 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	SLC41A2	Q96JW4	573 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	NUDCD1	Q96RS6	583 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	C1QTNF5	Q9BXJ0	243 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	DCLK3	Q9C098	648 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	EBF3	Q9H4W6	596 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	TMEM51	Q9NW97	253 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	SELENON	Q9NZV5	590 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	C5AR2	Q9P296	337 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	UBA2	Q9UBT2	640 aa	Predicted RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	OSGIN1	Q9UJX0	560 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	FZD10	Q9ULW2	581 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	FANCI	Q9NVI1	1328 aa		5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	KIAA0100	Q14667	2235 aa	Known RBP	5.67	□□□□□ -1.5
NRXN1-223	ENST00000625891	COL1A1	P02452	1464 aa	Predicted RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	IGHV4-28	A0A0C4DH34	117 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	KDM4E	B2RXH2	506 aa	Predicted RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	PI4K2B	G5E9Z4	385 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891		H0Y626	953 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	VWA5A	O00534	786 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	WNT9B	O14905	357 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TIMM23	O14925	209 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	ADAMDEC1	O15204	470 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	OGG1	O15527	345 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	OAS2	P29728	719 aa	Known RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	ATP5D	P30049	168 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	MATR3	P43243	847 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TNNT3	P45378	269 aa	Predicted RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	ARSE	P51690	589 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TAS2R40	P59535	323 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	NAE1	Q13564	534 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	BEND3	Q5T5X7	828 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	HIST2H2BC	Q6DN03	193 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	HIST2H2BD	Q6DRA6	164 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	FBXO46	Q6PJ61	603 aa	Predicted RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	QSOX2	Q6ZRP7	698 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TSPAN33	Q86UF1	283 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TTC30B	Q8N4P2	665 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	SPATA3	Q8NHX4	192 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	DEPDC1B	Q8WUY9	529 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	ERGIC1	Q969X5	290 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	FAM162A	Q96A26	154 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	RRNAD1	Q96FB5	475 aa	Known RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	JAKMIP1	Q96N16	626 aa	Known RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	PAFAH2	Q99487	392 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	DEFB129	Q9H1M3	183 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	PNN	Q9H307	717 aa	Known RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	TDRD3	Q9H7E2	651 aa	Known RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	FBXW11	Q9UKB1	542 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	CNTNAP2	Q9UHC6	1331 aa		5.66	□□□□□ -1.5
NRXN1-223	ENST00000625891	ALPK3	Q96L96	1907 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms