RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 VCLP18206 1134 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SRSF5Q13243 272 aaKnown RBP17.18■□□□□ 0.34
SREK1-216ENST00000612404 PTK2BQ14289 1009 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 ZCCHC23Q6ZST2 131 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SLC22A15Q8IZD6 547 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SLC22A18ASQ8N1D0 253 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 PHF21BQ96EK2 531 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SCARF2Q96GP6 870 aaPredicted RBP17.18■□□□□ 0.34
SREK1-216ENST00000612404 OSGEPL1Q9H4B0 414 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 MANSC1Q9H8J5 431 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 OXSMQ9NWU1 459 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SIRPGQ9P1W8 387 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 TPBGLP0DKB5 382 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 GFAPP14136 432 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 ATP5F1P24539 256 aaPredicted RBP17.18■□□□□ 0.34
SREK1-216ENST00000612404 SRP54P61011 504 aaKnown RBP17.18■□□□□ 0.34
SREK1-216ENST00000612404 TCEA2Q15560 299 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 SBSNQ6UWP8 590 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 LAYNQ6UX15 382 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 NEK10Q6ZWH5 1172 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 LPCAT2Q7L5N7 544 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 HID1Q8IV36 788 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 OR2M4Q96R27 311 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 DUSP15Q9H1R2 295 aaPredicted RBP17.18■□□□□ 0.34
SREK1-216ENST00000612404 KCNK6Q9Y257 313 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 PLEKHM1Q9Y4G2 1056 aa17.18■□□□□ 0.34
SREK1-216ENST00000612404 VPS13AQ96RL7 3174 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 A8MT66 165 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 TCP11X1B4DZS4 312 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 TNFRSF10CO14798 259 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 CD38P28907 300 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 RACK1P63244 317 aaKnown RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 PLOD1Q02809 727 aaPredicted RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 UBE2R2Q712K3 238 aaPredicted RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 TRIM42Q8IWZ5 723 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 FAM174AQ8TBP5 190 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 ASB11Q8WXH4 323 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 TIMM29Q9BSF4 260 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 CCDC134Q9H6E4 229 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 CD274Q9NZQ7 290 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 THADAQ6YHU6 1953 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 LAMA1P25391 3075 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 CCDC189A1A4V9 331 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 TRIM13O60858 407 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 VIMP08670 466 aaKnown RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 FGF3P11487 239 aaPredicted RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 TGFBIQ15582 683 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 PFKFB4Q16877 469 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 ALG11Q2TAA5 492 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 WDR45BQ5MNZ6 344 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 LIPMQ5VYY2 423 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 XKR5Q6UX68 686 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 DLG3Q92796 817 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 CCDC126Q96EE4 140 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 FOPNLQ96NB1 174 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 TM9SF3Q9HD45 589 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 NCKIPSDQ9NZQ3 722 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 PNMA8BQ9ULN7 279 aaPredicted RBP17.17■□□□□ 0.34
SREK1-216ENST00000612404 PSMD13Q9UNM6 376 aa17.17■□□□□ 0.34
SREK1-216ENST00000612404 SPTY2D1-AS1A0A0U1RR47 76 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 SNX2O60749 519 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 SHOX2O60902 331 aaPredicted RBP17.16■□□□□ 0.34
SREK1-216ENST00000612404 IPO13O94829 963 aaKnown RBP17.16■□□□□ 0.34
SREK1-216ENST00000612404 RASGRP1O95267 797 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 GUCA1CO95843 209 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 C8GP07360 202 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 MTHFD2P13995 350 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
SREK1-216ENST00000612404 HK3P52790 923 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 RPA4Q13156 261 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 PHKG1Q16816 387 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 PPP1R3AQ16821 1122 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 METRNLQ641Q3 311 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 FBXO39Q8N4B4 442 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 GAB3Q8WWW8 586 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 DPEP2Q9H4A9 486 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 ACSS2Q9NR19 701 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 FBXO4Q9UKT5 387 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 OARD1Q9Y530 152 aa17.16■□□□□ 0.34
SREK1-216ENST00000612404 PABPN1LA6NDY0 278 aaKnown RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 MATN4O95460 622 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 S100BP04271 92 aaPredicted RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 WNT1P04628 370 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 SEC24CP53992 1094 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 ASPHQ12797 758 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 ZNF542PQ5EBM4 170 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 ATG16L1Q676U5 607 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 BMP8AQ7Z5Y6 402 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 SLC22A9Q8IVM8 553 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 PTGR2Q8N8N7 351 aaPredicted RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 SPDYE1Q8NFV5 336 aaPredicted RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 TRIM54Q9BYV2 358 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 DNAH14Q0VDD8 3507 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 FFAR2O15552 330 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 CYP2A7P20853 494 aa17.15■□□□□ 0.34
SREK1-216ENST00000612404 DHPSP49366 369 aaPredicted RBP17.15■□□□□ 0.34
SREK1-216ENST00000612404 PRKAA2P54646 552 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms