RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ILKQ13418 452 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 KLHL38Q2WGJ6 581 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 HECTD2Q5U5R9 776 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 GUSBP11Q6P575 273 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 EFL1Q7Z2Z2 1120 aaKnown RBP15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 RBM12BQ8IXT5 1001 aaKnown RBP15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 ZBTB2Q8N680 514 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 FAM136AQ96C01 138 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 ATXN7L3BQ96GX2 97 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 NDNQ99608 321 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 RHOJQ9H4E5 214 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 POT1Q9NUX5 634 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 ZNF624Q9P2J8 865 aaPredicted RBP15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 GALPQ9UBC7 116 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 APOBEC2Q9Y235 224 aaKnown RBP15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 PCDHGA1Q9Y5H4 931 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 RNF215Q9Y6U7 377 aa15.22■□□□□ 0.03
SLC6A4-205ENST00000579221 SPAARA0A1B0GVQ0 90 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 OR52A4PA6NMU1 304 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 PPM1DO15297 605 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 RIPK2O43353 540 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 GP1BAP07359 652 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 MTHFD1P11586 935 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 CDK4P11802 303 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 NDUFS1P28331 727 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 ID4P47928 161 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 ACADVLP49748 655 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 UBE2IP63279 158 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 SIM1P81133 766 aaPredicted RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 E2F1Q01094 437 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 ABRQ12979 859 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 RBM20Q5T481 1227 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 PDZD3Q86UT5 571 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC22A15Q8IZD6 547 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 SPDYE1Q8NFV5 336 aaPredicted RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 UHMK1Q8TAS1 419 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 ZFPM2Q8WW38 1151 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 TFGQ92734 400 aaPredicted RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 FERD3LQ96RJ6 166 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 SLC38A3Q99624 504 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 GPR21Q99679 349 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 RBBP8Q99708 897 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 CCDC77Q9BR77 488 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 MCMBPQ9BTE3 642 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 IMP3Q9NV31 184 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 TRMT6Q9UJA5 497 aaKnown RBP15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 RAB21Q9UL25 225 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 IKBKGQ9Y6K9 419 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 FAM186AA6NE01 2351 aa15.21■□□□□ 0.03
SLC6A4-205ENST00000579221 RIF1Q5UIP0 2472 aaKnown RBP15.21■□□□□ 0.02
SLC6A4-205ENST00000579221 FAM95CA0A1B0GW59 222 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 GIPC1O14908 333 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 RFPL3O75679 317 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 CBSLP0DN79 551 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 ACADLP28330 430 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 ATP5DP30049 168 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 CBSP35520 551 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 GPR3P46089 330 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 SLC12A2P55011 1212 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 CDKN2DP55273 166 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 POU4F1Q01851 419 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 PDAP1Q13442 181 aaKnown RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 SLC29A2Q14542 456 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 UBAP2Q5T6F2 1119 aaKnown RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 EMBQ6PCB8 327 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 VRK3Q8IV63 474 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 UBLCP1Q8WVY7 318 aaPredicted RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 CCDC74AQ96AQ1 378 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 MRRFQ96E11 262 aaKnown RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 FOPNLQ96NB1 174 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 ABCG4Q9H172 646 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 MVB12BQ9H7P6 319 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 UCK1Q9HA47 277 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 SLC40A1Q9NP59 571 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 MED16Q9Y2X0 877 aa15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 MTO1Q9Y2Z2 717 aaKnown RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 CFAP20Q9Y6A4 193 aaKnown RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 PTPRZ1P23471 2315 aaPredicted RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 COL5A1P20908 1838 aaPredicted RBP15.2■□□□□ 0.02
SLC6A4-205ENST00000579221 FAM155BO75949 473 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 RPN2P04844 631 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 INHBAP08476 426 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 FTH1P19P0C7X4 201 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 ENO3P13929 434 aaPredicted RBP15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 SAT1P21673 171 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 KCNA4P22459 653 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 FDXRP22570 491 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 ALDH4A1P30038 563 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 MSH2P43246 934 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 RGS4P49798 205 aa15.19■□□□□ 0.02
SLC6A4-205ENST00000579221 LIMK2P53671 638 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms