RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 SLC2A4P14672 509 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 XRCC1P18887 633 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 ACADLP28330 430 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 DUSP3P51452 185 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 CDKN2DP55273 166 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 SIM1P81133 766 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 NAB1Q13506 487 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 DUS1LQ6P1R4 473 aaKnown RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 CCNI2Q6ZMN8 369 aaPredicted RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 STRA8Q7Z7C7 330 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 IFI44Q8TCB0 444 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 CD200R1Q8TD46 325 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 UBXN4Q92575 508 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 TSSK1BQ9BXA7 367 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 RHOJQ9H4E5 214 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 NSMCE4AQ9NXX6 385 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 PCDHGA1Q9Y5H4 931 aa16.27■□□□□ 0.2
SMCO4-204ENST00000527149 CFAP20Q9Y6A4 193 aaKnown RBP16.27■□□□□ 0.2
SMCO4-204ENST00000527149 CPED1A4D0V7 1026 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 RFPL3O75679 317 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 ABHD2P08910 425 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 CD9P21926 228 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 CSE1LP55060 971 aaKnown RBP16.26■□□□□ 0.19
SMCO4-204ENST00000527149 PLOD1Q02809 727 aaPredicted RBP16.26■□□□□ 0.19
SMCO4-204ENST00000527149 HHEXQ03014 270 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 HSPA14Q0VDF9 509 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 ILKQ13418 452 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 NAA30Q147X3 362 aaPredicted RBP16.26■□□□□ 0.19
SMCO4-204ENST00000527149 BRD3Q15059 726 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 SYTL3Q4VX76 610 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 PLEKHS1Q5SXH7 462 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 TRMT10CQ7L0Y3 403 aaKnown RBP16.26■□□□□ 0.19
SMCO4-204ENST00000527149 SPRED1Q7Z699 444 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 PIM3Q86V86 326 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 ZBTB2Q8N680 514 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 OR6C4Q8NGE1 309 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 ASZ1Q8WWH4 475 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.26■□□□□ 0.19
SMCO4-204ENST00000527149 CDKL2Q92772 493 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 TMEM159Q96B96 161 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 VPS39Q96JC1 886 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 GPR21Q99679 349 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 OLFM1Q99784 485 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 CPNE1Q99829 537 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 POT1Q9NUX5 634 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 KLHL42Q9P2K6 505 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 LRIT1Q9P2V4 623 aa16.26■□□□□ 0.19
SMCO4-204ENST00000527149 RIPK2O43353 540 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 APOA4P06727 396 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 PNLIPP16233 465 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 FDXRP22570 491 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 ATP5DP30049 168 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 GP5P40197 560 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 HALP42357 657 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 ID4P47928 161 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 PMS2P54278 862 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 TMED2Q15363 201 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 ACSBG2Q5FVE4 666 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 PPM1JQ5JR12 505 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 OTOAQ7RTW8 1153 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 SLC9B2Q86UD5 537 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 ZNF761Q86XN6 746 aaPredicted RBP16.25■□□□□ 0.19
SMCO4-204ENST00000527149 PPM1NQ8N819 430 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 SIDT2Q8NBJ9 832 aaKnown RBP16.25■□□□□ 0.19
SMCO4-204ENST00000527149 AENQ8WTP8 325 aaKnown RBP16.25■□□□□ 0.19
SMCO4-204ENST00000527149 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 C12orf66Q96MD2 445 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 RBBP8Q99708 897 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 CCDC3Q9BQI4 270 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 CCDC68Q9H2F9 335 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 UCK1Q9HA47 277 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 SLC40A1Q9NP59 571 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 IMP3Q9NV31 184 aaKnown RBP16.25■□□□□ 0.19
SMCO4-204ENST00000527149 EVA1BQ9NVM1 165 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 DHRS7Q9Y394 339 aa16.25■□□□□ 0.19
SMCO4-204ENST00000527149 AKAP13Q12802 2813 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 PTPRBP23467 1997 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 LILRA5A6NI73 299 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 E5RI56 91 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 KPNA5O15131 536 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 FAM155BO75949 473 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 CHRM3P20309 590 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 PHBP35232 272 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 GPR3P46089 330 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 PGGT1BP53609 377 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 LIMK2P53671 638 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 HECTD2Q5U5R9 776 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 TMEM26Q6ZUK4 368 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 RASGRP3Q8IV61 690 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 CTAGE3PQ8IX95 158 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 GPATCH11Q8N954 259 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 AVL9Q8NBF6 648 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 CYTH2Q99418 400 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 RAB21Q9UL25 225 aa16.24■□□□□ 0.19
SMCO4-204ENST00000527149 FAM95CA0A1B0GW59 222 aa16.23■□□□□ 0.19
SMCO4-204ENST00000527149 A0A1W2PQM1 296 aa16.23■□□□□ 0.19
SMCO4-204ENST00000527149 B4GAT1O43505 415 aa16.23■□□□□ 0.19
SMCO4-204ENST00000527149 VPS26AO75436 327 aa16.23■□□□□ 0.19
SMCO4-204ENST00000527149 WISP3O95389 354 aaPredicted RBP16.23■□□□□ 0.19
SMCO4-204ENST00000527149 VIPP01282 170 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms